Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0674 |
Symbol | |
ID | 4422507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 642161 |
End bp | 642844 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639674382 |
Product | membrane-associated serine protease |
Protein accession | YP_818157 |
Protein GI | 116617786 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.263581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCAT TAAAAGAACA ATATCAAACA GCACCGATAA CGACAATTAT ATTTTTGGTA ACTACTTTTG TATTCCTAAT TGAGCTTGTA TTAAGCCGTG GAACGACGGA GAATAGTGAA TTCTTAATTA ATATGGGTGC AAAATGGGGA CCATATATCC AGTTAAAACA TGAATACTGG CGATTGTTAA CGCCGGTTTT TCTCCATGCT GGTTTTTTAC ACATTGTCAC TAATATGATC ACTTTATGGT TTATTGGACC ACTTGTTGAA CGAGCATTTG GCAGTACAAA ATTTTTTGGA CTATATTTTT TTGGTGGTAT TATTGGTAAT ATTTTTTCAT ATTTATTGGC GCCGTCGAGT GTTTCTGTAG GTGCATCTAC AGCACTTTTT GCCATGTTTG GTGGACTAAT TTTGTATGCC ATTCGTTTTA AAGAAGATCC GCAAGTTAAG TCGATGGGAA CAATGTTGGG GCTCTTTGTC ATTTTGAATT TAGTCACAGG ATTTTCATCA ACGGATATTG ATATATGGGG GCACATCGGT GGCTTAATCG GTGGGATGAT GTTTGCGGTA ATGTTTGGTT TCTATGGGCG CAGTGGGAAA TACGCTATTC GAGTGCGCTT AATCATGGGC GCTATAACAA TATTGCTGAT TATTTTAACT TTTTGGGCAG GTTTAAGAAT ATGA
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Protein sequence | MKALKEQYQT APITTIIFLV TTFVFLIELV LSRGTTENSE FLINMGAKWG PYIQLKHEYW RLLTPVFLHA GFLHIVTNMI TLWFIGPLVE RAFGSTKFFG LYFFGGIIGN IFSYLLAPSS VSVGASTALF AMFGGLILYA IRFKEDPQVK SMGTMLGLFV ILNLVTGFSS TDIDIWGHIG GLIGGMMFAV MFGFYGRSGK YAIRVRLIMG AITILLIILT FWAGLRI
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