Gene LACR_C16 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_C16 
Symbol 
ID4405804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008505 
Strand+ 
Start bp19197 
End bp20363 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content35% 
IMG OID639654557 
Productreplication initiator protein 
Protein accessionYP_796484 
Protein GI116326563 
COG category[L] Replication, recombination and repair 
COG ID[COG5527] Protein involved in initiation of plasmid replication 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTA TACCAAATAA CAATGATTTT AACGAGAAAA AGGTGGTATG TACCTTGAAT 
GACCTTGAAA AACGCAAAGT GGTGGAGCAT AACAGCTTGA TTACCTCTAT GGCTAAAATG 
CAAAAGACCG CTCTAAAAAT GTTTGAACTA GCAGTGTCTT GTATTGATAC GGAAAATCCG 
CCCAAAGATA ATATTATCTA TCTTTCAAAA AAAGAGTTGT TTGCTTTTTT TGATGTATCA 
TCAGCAAGTA AACACACACG TTTTAAAGAA GCCATTGAGT TGATGCAGAA ACAAGCTTTT 
TTCCAAATTA AAGAAGTCAA AGATAAGGGT TATGAAATGA CAAGCATTGT GCCTATTCCA 
ACAGTTAAGT GGAACAGTTA CAATGATGAT GTAATGATAC AATTTAATCA GTTTATTATG 
CCTTATCTGA TTGACTTAAA GGCAGAGTTT ACGCAATATA AAATTTCTGA ATTAAAAGAA 
CTCAATAGCA AGTATTCGAT TATTTTGTAT CGTTGGTTAT CTATGAATTA TAACCAATAC 
GAGCATTACA GTGCCAAAGG GGGACGAAGA GCCGAGCAAG TAGAAGCCTA CCGCAACCCC 
TCAATATCAG TGAAAGAATT ACGAGAAATA ACTGATACCG TCAATGAATA CCCACGTTTT 
GATAATTTTG AGAGAAGAGT GTTGAAAATT GCACTTAAAG AAATCAACGC TCACACCTCT 
TTTAACGTAT CTTACGAGAA AGTCAAAAAA GGGCGAAGCA TTGATTCTAT TGTCTTTCAT 
ATTGAGAAGA AACGCATGGC AGACGATAAC AGTTATAAGT TAGAAGATAA AGATTATCAA 
TCCGACAAAG AGGAAAAATC AAGAAATGAA GCTGACTTAT TAAAACAGGC AATGGAAAGT 
AAGTACACAC GATTATTGAT TGAAAACTTT CTCTTATCCC CTCTTGAAAT GACGGACACG 
GCACTTATGG CAGGTTTGCA AAAGAACGTC TATCCGCTTT ATGACGAGTT AAAGGAATTA 
AGAGGATTGA ATGGGGTCAA AGACCACTTG TCTTATGTAT CTAGCAAACA AGAAGCCTAT 
TCTAAACGCA ATGTAGCGAA GTATCTGAAA AAAGCAATCG AGCAATATCT ACCTACGGTT 
AAAAGGCAGG AATTAGACCA TGAGTAA
 
Protein sequence
MNIIPNNNDF NEKKVVCTLN DLEKRKVVEH NSLITSMAKM QKTALKMFEL AVSCIDTENP 
PKDNIIYLSK KELFAFFDVS SASKHTRFKE AIELMQKQAF FQIKEVKDKG YEMTSIVPIP 
TVKWNSYNDD VMIQFNQFIM PYLIDLKAEF TQYKISELKE LNSKYSIILY RWLSMNYNQY 
EHYSAKGGRR AEQVEAYRNP SISVKELREI TDTVNEYPRF DNFERRVLKI ALKEINAHTS 
FNVSYEKVKK GRSIDSIVFH IEKKRMADDN SYKLEDKDYQ SDKEEKSRNE ADLLKQAMES 
KYTRLLIENF LLSPLEMTDT ALMAGLQKNV YPLYDELKEL RGLNGVKDHL SYVSSKQEAY 
SKRNVAKYLK KAIEQYLPTV KRQELDHE