Gene LACR_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2587 
Symbol 
ID4433361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp2418009 
End bp2418887 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content35% 
IMG OID639668252 
Productribonuclease HIII 
Protein accessionYP_812118 
Protein GI116513211 
COG category[L] Replication, recombination and repair 
COG ID[COG1039] Ribonuclease HIII 
TIGRFAM ID[TIGR00716] ribonuclease HIII 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTG TCCTAAAATT AAGCTCTAAT GCCTGTCAGC AACTCTCTGA AAAATATAAA 
TCTTACGAGC AGACTTCTAA AAATCCTTAT ATTCGCTTTT TTGCTAAAGT TGGGAAAACT
TCTATTTCTG TTTATACATC TGGAAAAGTA GTCTTTCAAG GAAGTGATGC TGAAAAAATT
GCTAGTGAAT TTGGACATGT TGCTCAAGTT GTTCCTAAAA AGCAAACTAA TCTTATTGGG
ACTGACGAGG TAGGAAATGG TTCATATTTT GGTGGCTTAA TGGTTACTGC AAGTTTTGTC
AGTGATAATC ATTTGAAATT TTTAAAAGAA ATGGGTGTCG CTGATTCTAA AAAATTAACT
GACGAAAAAA TTTGTCAGAT TGCCCCCAAA TTGATAGAGG AGATTCCTCA TGTTGCCTTG
GTTGTTGAGC CTGAGAAGTA TAACGAGGTG ATTGCTTCGG GCTATAATGC TGTCAGCATC
AAGGTTGCCT TACATAATCA AGCAATTTAT CTCCTTGAAA AGCAACTCGG TAGCCAGCCT
GAAAGTATTG TTATCGATGC TTTCACAACC GAAGCAAATT ATAAAAAATA TGTTAGCGCA
GAAAAAAATC ACCCACTGAC AAACGTAACT TTACTGACAA AAGCTGAAGA TCAATTTTTA
GCTGTTGCAG TTAGTTCAAT TATTTCTCGT TATAAGTTTT TGGAAAATCT CAAAAAGTTA
TCAAAAGAAT CTAGCTTTAC TTTACCCAGT GGCGCAGAAA ATTTGTCTGA CAAAGTTGCT
GCTCAAATCA TTAAGAGTCA AGGGATTGAT GCTCTGAATC ACTTAGCTAA ATTACATTTT
GCCAATACAC AAAAAGCGAT GAAAATCGCT CAATTATAG
 
Protein sequence
MNIVLKLSSN ACQQLSEKYK SYEQTSKNPY IRFFAKVGKT SISVYTSGKV VFQGSDAEKI 
ASEFGHVAQV VPKKQTNLIG TDEVGNGSYF GGLMVTASFV SDNHLKFLKE MGVADSKKLT
DEKICQIAPK LIEEIPHVAL VVEPEKYNEV IASGYNAVSI KVALHNQAIY LLEKQLGSQP
ESIVIDAFTT EANYKKYVSA EKNHPLTNVT LLTKAEDQFL AVAVSSIISR YKFLENLKKL
SKESSFTLPS GAENLSDKVA AQIIKSQGID ALNHLAKLHF ANTQKAMKIA QL