Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2587 |
Symbol | |
ID | 4433361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 2418009 |
End bp | 2418887 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639668252 |
Product | ribonuclease HIII |
Protein accession | YP_812118 |
Protein GI | 116513211 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1039] Ribonuclease HIII |
TIGRFAM ID | [TIGR00716] ribonuclease HIII |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTG TCCTAAAATT AAGCTCTAAT GCCTGTCAGC AACTCTCTGA AAAATATAAA TCTTACGAGC AGACTTCTAA AAATCCTTAT ATTCGCTTTT TTGCTAAAGT TGGGAAAACT TCTATTTCTG TTTATACATC TGGAAAAGTA GTCTTTCAAG GAAGTGATGC TGAAAAAATT GCTAGTGAAT TTGGACATGT TGCTCAAGTT GTTCCTAAAA AGCAAACTAA TCTTATTGGG ACTGACGAGG TAGGAAATGG TTCATATTTT GGTGGCTTAA TGGTTACTGC AAGTTTTGTC AGTGATAATC ATTTGAAATT TTTAAAAGAA ATGGGTGTCG CTGATTCTAA AAAATTAACT GACGAAAAAA TTTGTCAGAT TGCCCCCAAA TTGATAGAGG AGATTCCTCA TGTTGCCTTG GTTGTTGAGC CTGAGAAGTA TAACGAGGTG ATTGCTTCGG GCTATAATGC TGTCAGCATC AAGGTTGCCT TACATAATCA AGCAATTTAT CTCCTTGAAA AGCAACTCGG TAGCCAGCCT GAAAGTATTG TTATCGATGC TTTCACAACC GAAGCAAATT ATAAAAAATA TGTTAGCGCA GAAAAAAATC ACCCACTGAC AAACGTAACT TTACTGACAA AAGCTGAAGA TCAATTTTTA GCTGTTGCAG TTAGTTCAAT TATTTCTCGT TATAAGTTTT TGGAAAATCT CAAAAAGTTA TCAAAAGAAT CTAGCTTTAC TTTACCCAGT GGCGCAGAAA ATTTGTCTGA CAAAGTTGCT GCTCAAATCA TTAAGAGTCA AGGGATTGAT GCTCTGAATC ACTTAGCTAA ATTACATTTT GCCAATACAC AAAAAGCGAT GAAAATCGCT CAATTATAG
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Protein sequence | MNIVLKLSSN ACQQLSEKYK SYEQTSKNPY IRFFAKVGKT SISVYTSGKV VFQGSDAEKI ASEFGHVAQV VPKKQTNLIG TDEVGNGSYF GGLMVTASFV SDNHLKFLKE MGVADSKKLT DEKICQIAPK LIEEIPHVAL VVEPEKYNEV IASGYNAVSI KVALHNQAIY LLEKQLGSQP ESIVIDAFTT EANYKKYVSA EKNHPLTNVT LLTKAEDQFL AVAVSSIISR YKFLENLKKL SKESSFTLPS GAENLSDKVA AQIIKSQGID ALNHLAKLHF ANTQKAMKIA QL
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