| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2344 |
|---|
| Symbol | |
|---|
| ID | 4433963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 2190567 |
|---|
| End bp | 2191409 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639668022 |
|---|
| Product | amino acid ABC transporter periplasmic protein |
|---|
| Protein accession | YP_811908 |
|---|
| Protein GI | 116513001 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TAAAATTATT GACTCTTGCA ACACTTGGAA TTGCCTCAAT TGGCTTACTT
GCTGCTTGCT CGTCAAAAGA TAATTCATCT TCTAAATCAA CAGATAAAGT GACAACAGTA
ACCGTTGCAA CTTCTGCCGC TTCTGTGCCT TATGAATACA GCGAAAATGG TAAAATGACT
GGTTTTGAAT ATGATATTTT AAAAGCAGCT GACAAGGACA TGAAAGATTA TAAATTCGAG
TTCAAAGTCT ACGAAGATAG TGCGATTTTG GCTGCTTTAG ATGGTGGTCG CGCACAAATT
GCGGCAAATA ATTTTGGTAA AACTAAAGCT CGTTCTGAAA AATATCTCTT TAGTTATCCT
GTTCGTCAAG GAATTGATGC TATTTTCTCA ACTTCTAAAG AAAACATCAC TAAAATTTCC
CAACTTGCTG GCAAAACAAC AGAAATTCCT GCTGGAACAA ACTATGGTGA TATGTTTGAA
AGTTGGAATA AAAACCATCC CGACAAAAAA ATTGATGTTA AATATAGCCA ACGTCCTTTA
GCTGACCGTC TATCTGCGAT TGCTAGTGGA CAAATTGATT TCTTATTTGC CTCTAAAGCA
CCAGCAGAAA ATTTAATCAG ACAACATGCA ATTACAGGTT TGGTTGATAC TGTTCCCACA
GACTTGAACA AACAATCTGA GTTTAAAACT TATGATTACT TTATCCTTGA TAACAGTCAA
ACCAAATTAC AAAAAGATTT GAATGCAGAG CTCAAAAAAC TCTATGAAAA CGGAACGCTA
AAAGAACTCT CAGAAAAATA TTTCCATGAC AGCCATATTC CAGCTGCTGA CCAATTCAAA
TAA
|
|---|
| Protein sequence | MKKIKLLTLA TLGIASIGLL AACSSKDNSS SKSTDKVTTV TVATSAASVP YEYSENGKMT
GFEYDILKAA DKDMKDYKFE FKVYEDSAIL AALDGGRAQI AANNFGKTKA RSEKYLFSYP
VRQGIDAIFS TSKENITKIS QLAGKTTEIP AGTNYGDMFE SWNKNHPDKK IDVKYSQRPL
ADRLSAIASG QIDFLFASKA PAENLIRQHA ITGLVDTVPT DLNKQSEFKT YDYFILDNSQ
TKLQKDLNAE LKKLYENGTL KELSEKYFHD SHIPAADQFK
|
|---|
| |