| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2221 |
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| Symbol | |
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| ID | 4432712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 2080828 |
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| End bp | 2081832 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639667904 |
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| Product | tRNA-dihydrouridine synthase |
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| Protein accession | YP_811790 |
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| Protein GI | 116512883 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.65395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATGG ACAAAATTTA CAACGAATCG TGGAAAATTG GCGATATCGA AATAAAAAAT
AAAATTGTAC TGGCACCAAT GGCCGGAATT ACAAATAAAG CTTTTCTGAC CACTGCCAAA
GAATTCGGAG CTGGACTTGT TGTAACCGAG ATGATTTCTG ATAAAGGAAT CGAACATCGC
AACAAGAAAA CTTTGGAAAT GATGGATTTT GAAGGCGTTC CACATCCGCT ATCTATGCAA
ATTTTTGGTG GTGAAGTGGA TACTTTAGTT GAAGCTGCTA AATTTGTTGA AGCAAATACA
GTTGCTGATA TTATTGATAT CAACATGGGT TGCCCAGTAC CTAAAGTAAC AAAAAATGAA
GCAGGTTCTC GACTTTTGCT TGACCCTGAT AAAGTTTACG ATGTGGTTAG CGCAGTCAGT
AAAGCCATTT CAAGACCATT GACAGTAAAA ATCCGAATCG GTTGGGACGA TGACCACCTT
TTTGCCGTTG AAAATGCTAA AGCAATTGAA GCGGGTGGTG GAGCAGCAGT TTCCATGCAC
GCACGCACTA AAGCTCAAGC CTACACAGGA AATGCCCAAG AAAACTGGCA CTGGCTCAAA
AAATTGACTG ACAATGTCAA TATTCCAGTC ATCGGAAATG GTGATGTCAA GACTCCAGAA
GATGCGAAAC GTATGATTGA TGAAACAGGC GTGACTGCGG TCATGATGGG ACGTGCTGCT
CTTGGAAATC CGTGGATTCT TCATCGTACA GAACACTACT TGCGTACAGG GGAACTTCTT
GCTGAACCTA CGGTTGCTGA AAAGATGGAA ATTGCAAAAT TACATTTGGC CCGTCTCGTC
GAATTAAAAG GGGACAATCT TGCTAGTCGA GAATTCCGTC AGCATGCAGC TTACTATCTT
AAAGGAGCTT CTCGTGCAGC AAAAGTAAAA GTTGCAGTCA ATCAAGCTGA ATCGCAAGCA
GAAATTATCA CGATTCTTGA TAATTTTGTA AGTGGAATTA AATAA
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| Protein sequence | MTMDKIYNES WKIGDIEIKN KIVLAPMAGI TNKAFLTTAK EFGAGLVVTE MISDKGIEHR
NKKTLEMMDF EGVPHPLSMQ IFGGEVDTLV EAAKFVEANT VADIIDINMG CPVPKVTKNE
AGSRLLLDPD KVYDVVSAVS KAISRPLTVK IRIGWDDDHL FAVENAKAIE AGGGAAVSMH
ARTKAQAYTG NAQENWHWLK KLTDNVNIPV IGNGDVKTPE DAKRMIDETG VTAVMMGRAA
LGNPWILHRT EHYLRTGELL AEPTVAEKME IAKLHLARLV ELKGDNLASR EFRQHAAYYL
KGASRAAKVK VAVNQAESQA EIITILDNFV SGIK
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