Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2054 |
Symbol | |
ID | 4432428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1945722 |
End bp | 1946909 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639667749 |
Product | elongation factor Tu |
Protein accession | YP_811646 |
Protein GI | 116512739 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00228831 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAAG AAGTATACGA CCGTAGCAAA CCACACGTTA ATATTGGTAC TATCGGACAC GTTGACCATG GTAAAACTAC CCTCTCAGCT GCAATCTCTA AAGTATTGTC TGACAAAGGT TACTCTAAAG CGACTGACTT TGCATCTATC GATGCTGCTC CAGAAGAACG CGAACGTGGT ATCACTATCA ACACTGCTCA CATCGAGTAC GAAACTGAAA AACGTCACTA TGCCCACATC GACGCTCCAG GTCACGCGGA CTACGTTAAA AATATGATCA CTGGTGCTGC CCAAATGGAC GGTGCAATCC TCGTTGTTGC TGCAACTGAC GGACCAATGC CACAAACTCG TGAACACATC TTGCTTTCAC GTCAAGTTGG TGTTAAATAC CTTATCGTCT TCCTTAACAA AGCAGACCTT GTTGATGATG AAGAATTGAT GGAACTCGTT GAAATGGAAG TTCGTGACCT CTTGAGCGAA TACGACTTCC CAGGTGACGA TATTCCTGTA ATCGCTGGTT CAGCACTTGG TGCTTTGAAC GGTGAACCAC AATGGGTTGC TAAAGTTGAA GAATTGATGG ACATCGTTGA TGAATACATC CCAACTCCAG AACGCGACAC TGACAAACCA CTCCTTCTTC CAGTCGAAGA CGTATTCTCT ATCACTGGTC GTGGTACTGT TGCTTCAGGA CGTATCGAAC GTGGTACTGT TAAAGTTGGT GACGAAGTTG AAATCGTTGG TATCAAAGAA GAAACTAAGA AAGCTGTTGT TACTGGTATC GAAATGTTCC GTAAAACACT TACTGAAGGT CTTGCTGGTG ATAACGTCGG TGCACTTCTC CGTGGTATCC AACGTGACGA AATCGAACGT GGTCAAGTTA TTGCTAAACC AGGTTCAATC ACTCCACACA AACTTTTCGA AGGTGAAGTT TACGTATTGA GCAAAGAAGA AGGCGGACGT CACACTCCAT TCTTCGACAA CTACCGTCCT CAATTCTACT TCCACACAAC TGACGTTACT GGTTCAGTTA AACTTCCTGA AGGAACTGAA ATGGTAATGC CTGGTGACAA CGTGCATATT GACGTTGAAT TGATCCACCC AGTTGCGATC GAACAAGGTA CTACTTTCTC TATCCGTGAA GGTGGACGTA CTGTTGGTTC AGGTATCGTT GCTGAAATCA AAGCTTAA
|
Protein sequence | MAKEVYDRSK PHVNIGTIGH VDHGKTTLSA AISKVLSDKG YSKATDFASI DAAPEERERG ITINTAHIEY ETEKRHYAHI DAPGHADYVK NMITGAAQMD GAILVVAATD GPMPQTREHI LLSRQVGVKY LIVFLNKADL VDDEELMELV EMEVRDLLSE YDFPGDDIPV IAGSALGALN GEPQWVAKVE ELMDIVDEYI PTPERDTDKP LLLPVEDVFS ITGRGTVASG RIERGTVKVG DEVEIVGIKE ETKKAVVTGI EMFRKTLTEG LAGDNVGALL RGIQRDEIER GQVIAKPGSI TPHKLFEGEV YVLSKEEGGR HTPFFDNYRP QFYFHTTDVT GSVKLPEGTE MVMPGDNVHI DVELIHPVAI EQGTTFSIRE GGRTVGSGIV AEIKA
|
| |