Gene LACR_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1609 
Symbol 
ID4432262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1520584 
End bp1522173 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content36% 
IMG OID639667321 
ProductABC transporter permease/ATP-binding protein 
Protein accessionYP_809531 
Protein GI116512315 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00128581 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAGT ATCTTAAAGA ATTCAAATTT GAAAATTTTA TGGTTTTCTT ACTTATCACG 
ATTGACATTG CTCTTGCGGT CTTGAGTTCG GTCTTTTTGG CCAATGTACT CAATTCTTTG
ATTGCTAGAG AAATGAATCA ATTTTTCTTA TGGTTAGCTA TTGACATTGT CCTCTGGGTG
GTCGATAGTT TTGTTCAGGG AGTGCGTGAT GTTTGGAAAG AAATTGCCAT ACAAAAGCAG
CTTAATGCTG TACGCCGGGA TATCATTGAA CCTCTGACGG AAATTTCTTA TTCTGATTTT
GAAAAAAACA GTAAAGAAGA TTATAATTCC TGGTTAAATA ATGGTACAAA ACTACTTTAT
GATAATGGTT TCCATCAGAT TTATTTTGTT TATACGGGAA TCGTTGCGAT GCTATTCTCA
GGAATTGCAA TCATCTTTTT CCACTGGGTA TTGCTTTTGA CAACACTTCT AGTTGGAGCC
ATTTTGTTCT ATTTTCCAAA AGTCTTTAAG AAATCAGTGG AACGAGACAC AGAACAGGTT
TCAGATGTTG CTAATGATGC TTTAGCGACA TCTACAGATT ACTTACGTGG CTATGAAGTG
CTCTATCACA ATAAACAACT GGGGCTGATG CAAGAGCGAA CCATGGGTAA ATTTAATCAA
TTGGCTACGG CAAATGTAAA ATTAATTTTT ACTCGGGCTT GGATGCAATA TTCTTTATTA
GGGGCCAGTA TGTTGGGACA ATTTTTGATT TTAGCTGTTG CTGGTTTTCT CATCATGAAT
GGTCAGATTG GAATCGGTGT TGTCATGAGC GTGGGGAATC TGTCAGGAAC AGTTACTAAT
TACTCAAAAA GTGTAGTAAA TAGCTTGATT TTGCTCAATG CTACTGGGAA ATTGCTAGAA
AAATATGGAA AAATTGCTGA CGAATCAAAA GTTACTGACG GAGAAGAAGT GACAGACTTT
GAAAGTAAAC TGGAGTTAAA AAATCTGTCT GTCGCTTTTC CTGATGGCCA AAAAATTGAA
TATCCAGAAA TTGTCATTGA AAAAGGGAAG AAATATGCGA TTATCGGGGA TAGTGGTAGT
GGTAAATCAA CCTTAATTAA TTTGCTAGTC GGCAATAAGC GAGATTATGA AGGAGAAATT
TTACTTGATG GAAAAGATTA TAAGGGAATT AACCGAAAAT CTTTACCACA TGTCATGAGC
GTAATTATGC AATTTCCTTA CCTTTTTAGG GAAACGGTAG AGGAAAATTT GACTTTGGGT
CGTAAGATTT CGCCAGATAT TTTTGATAAG TCGATTAGAA TTGCCTGTGC TGATGATTTT
GTGTTTAATA AACTTGATAC GATTTATGAT AAAAATTTAT CAGGAGGTCA GCAAGAAAGA
TTATCTGTTG CGCGGGAATT AATGGGGACA AAACCGATTT TAGTGATGGA TGAAAGCACT
GCCAGTGTTG ATAAGAAAAC GGCTCTGGCT GTAGAAAAAA ATATTTTAGA AAATCCCGAT
TTGACTGTGA TTATGATTAC TCACCATTTG TATGATGAAA CTCAAAATTA TTTGGATGAA
GTCATTCATT TAGGTCAGGG AATTGCTTAG
 
Protein sequence
MVKYLKEFKF ENFMVFLLIT IDIALAVLSS VFLANVLNSL IAREMNQFFL WLAIDIVLWV 
VDSFVQGVRD VWKEIAIQKQ LNAVRRDIIE PLTEISYSDF EKNSKEDYNS WLNNGTKLLY
DNGFHQIYFV YTGIVAMLFS GIAIIFFHWV LLLTTLLVGA ILFYFPKVFK KSVERDTEQV
SDVANDALAT STDYLRGYEV LYHNKQLGLM QERTMGKFNQ LATANVKLIF TRAWMQYSLL
GASMLGQFLI LAVAGFLIMN GQIGIGVVMS VGNLSGTVTN YSKSVVNSLI LLNATGKLLE
KYGKIADESK VTDGEEVTDF ESKLELKNLS VAFPDGQKIE YPEIVIEKGK KYAIIGDSGS
GKSTLINLLV GNKRDYEGEI LLDGKDYKGI NRKSLPHVMS VIMQFPYLFR ETVEENLTLG
RKISPDIFDK SIRIACADDF VFNKLDTIYD KNLSGGQQER LSVARELMGT KPILVMDEST
ASVDKKTALA VEKNILENPD LTVIMITHHL YDETQNYLDE VIHLGQGIA