Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1541 |
Symbol | |
ID | 4433533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1457897 |
End bp | 1459618 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639667260 |
Product | ABC-type proline/glycine betaine transport system, permease component |
Protein accession | YP_809470 |
Protein GI | 116512254 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components [COG4176] ABC-type proline/glycine betaine transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.11623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGATT TAGTGATTGG AAAAATACCA TTAGCCAACT GGGTATCGTC AGCAACAGAT TGGATTACAA GTACATTTAG TTCGGGTTTT GATGTGATTC AAAAATCAGG AACAGTGTTG ATGAACGGAA TAACAGGTGC TTTAACTGCA GTTCCATTCT GGCTGATGAT TGCTGTTGTT ACTATCCTAG CAATTTTGGT TTCAGGTAAA AAGTTTGCCT TCCCATTGTT TACTTTTATT GGTCTTTGTT TAATTGCCAA TCAAGGCTTA TGGTCAGATT TGATGAGTAC GATTACCCTT GTCTTACTTT CAAGTTTGTT ATCAATTATC ATAGGGGTCC CTCTAGGAAT TTGGATGGCA AAATCTGAAC TAGTAGCTAA GATTGTTCAA CCTATATTGG ACTTCATGCA AACCATGCCT GGTTTTGTTT ATTTGATTCC AGCAGTTGCC TTCTTTGGTA TTGGGGTTGT TCCTGGGGTA TTTGCTTCAG TAATCTTTGC TTTGCCACCG ACTGTCAGAA TGACTAACTT AGGTATTCGC CAAGTTTCAA CTGAATTAGT TGAAGCAGCA GATTCATTTG GTTCGACTGC CCGTCAGAAG TTATTTAAAT TGGAATTTCC TTTAGCTAAA GGAACAATTA TGGCTGGTGT TAACCAAACA ATTATGTTGG CTCTTTCTAT GGTCGTTATT GCCTCTATGA TTGGTGCACC TGGTTTAGGT CGTGGAGTAC TAGCTGCTGT TCAATCAGCT GATATTGGTA AGGGATTTGT AAGTGGGATT TCATTAGTTA TTTTGGCTAT TATTATTGAC CGCTTTACGC AAAAACTTAA TGTTTCTCCT TTAGAAAAAC AAGGAAATCC TAAGCTCAAA AAATGGAAAC GTTGGATTGC TATCGTTTCA TTGTTAGCCT TAATTGTTGG TGCTTTTTCG GGAATGTCTT TTGGGAAAAA ATCTTCTGAT AAAAAAGTGG ATTTAGTTTA TATGAACTGG GACTCAGAAG TTGCGTCAAT CAATGTTTTG ACCCAAGCAA TGGAAGAACA TAGTTTTGAT GTTACAACGA CTGCACTTGA TAACGCAGTT GCTTGGCAAA CTGTGGCTAA TAGTCAAGCT GATGGAATGG TTTCTGCTTG GTTGCCAAAC ACTCATAAGA CCCAATGGAA AAAATATGGT AAGTCTGTTG AGTTATTAGG TCCAAATCTT AAAGGCGCTA AAGTAGGATT TGTTGTGCCA AGTTATATGA ATGTGAATTC AATTGAAGAT TTGACTAATC AGGCCAATAA AACAATCACA GGAATTGAGC CTGGTGCAGG TGTCATGGCT GCCAGTGAAA ATACACTTAA GAGCTATAGT AATCTTAAAG ATTGGAAGCT TGTTCCTTCA TCATCTGGTG CAATGACTGT TGCTCTTGGT GAAGCCATTA AACAACATAA AGACATTGTA ATCACTGGTT GGTCTCCTCA TTGGATGTTC AATAAATATG ATTTGAAATA CTTAGCTGAT CCGAAAGGAA CAATGGGGAC TTCAGAAAAT ATTAATACAA TTGTGCGCAA AGGATTGAAA AAAGAAAATC CTGAAGCTTA TAAGGTTTTG AATAATTTTA ATTGGACCAC TAAAGATATG GAATCTGTTA TGCTTGATAT TCAAAATGGT AAGACACCAG AAGCAGCTGC AAAAGCTTGG ATTAAAGACC ATCAAAAACA AGTTGATAAA TGGTTTAAAT AA
|
Protein sequence | MIDLVIGKIP LANWVSSATD WITSTFSSGF DVIQKSGTVL MNGITGALTA VPFWLMIAVV TILAILVSGK KFAFPLFTFI GLCLIANQGL WSDLMSTITL VLLSSLLSII IGVPLGIWMA KSELVAKIVQ PILDFMQTMP GFVYLIPAVA FFGIGVVPGV FASVIFALPP TVRMTNLGIR QVSTELVEAA DSFGSTARQK LFKLEFPLAK GTIMAGVNQT IMLALSMVVI ASMIGAPGLG RGVLAAVQSA DIGKGFVSGI SLVILAIIID RFTQKLNVSP LEKQGNPKLK KWKRWIAIVS LLALIVGAFS GMSFGKKSSD KKVDLVYMNW DSEVASINVL TQAMEEHSFD VTTTALDNAV AWQTVANSQA DGMVSAWLPN THKTQWKKYG KSVELLGPNL KGAKVGFVVP SYMNVNSIED LTNQANKTIT GIEPGAGVMA ASENTLKSYS NLKDWKLVPS SSGAMTVALG EAIKQHKDIV ITGWSPHWMF NKYDLKYLAD PKGTMGTSEN INTIVRKGLK KENPEAYKVL NNFNWTTKDM ESVMLDIQNG KTPEAAAKAW IKDHQKQVDK WFK
|
| |