| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1448 |
|---|
| Symbol | |
|---|
| ID | 4432745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1366233 |
|---|
| End bp | 1369292 |
|---|
| Gene Length | 3060 bp |
|---|
| Protein Length | 1019 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639667170 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_809380 |
|---|
| Protein GI | 116512164 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGC AGAAAAAAAA GGCACCACGT AAAAAAGGTA AAGTAATAAC CAAGCGTAAA
ATACTGTCAG CGACCATGTC TGGGACGTTA TTGATGACTT CGGTAATTAT CCCAACAGCT
TATAGCTTGT TATCAAATCA GATCACTGCA AAAGCTGCTG CTTTAAATAT TGATCTCTTG
CAAAATATTA CTTCAAGCAA TAATAGTGGG ACAACTACAA GCAATCGCTG GGCTAGTGGT
TCAGGAACTC GAAATGTTGA TTTTACAATT GCCGGAGGTG CATTGGCTAA TGTCGCCCTT
CTTTCAGGGC CTCGTTATGC TGTTTTGACA ATTCCGCAAG AGCTTCGTGG CTTTGTTGCT
GCTAACGGGA ATACTTCGGT TACAACGAAT ATCACGATTG ACTTTAATAA AGTTGCACTC
ATCAATGCAA TTGTTAGTGC TGGAGATACT TTTGTTGCGG GAGTAGCCAC AATCTTAGGC
AATAACCCTT TAGCCAGTAT TAATTTAACA GAAGTGACGA CTCAGCTTAA TCTATTAAAG
GGAAGTCAAA ATATTGGCGG TGGGACATTT ACATCAGCCA CGACCCTTAA TGGAAATTCA
GTGCTGAGTG CGCCTTTAAA TGATGGGATG GGAGCAATTT TAGCTCAAAA TGTCAGAACT
ATTCTAGAAA ATTTACGAAC GGCAGTTAGT AATCTTTCTG CAACAGGGTT AGCAGCACCT
GCCGCTAATA CCGCCCTTGC TTTGATCAAG CCTGCACTGA TAACAGCCAT AGATAATGTT
TTAGTTCCAT TAGTAAATGG AACAGGTGGA ATTTTAGATC TTCTTTTAAA TGCTTCGGCA
CTTGGGAATA CAAGAATTAC CATTCCTACA AAAATTACTG CCCCACCAAG TATTCAAAGT
AACCTCGATG CGCGTTTTGT AGGTTCTGCT GTTCAAACCA ACTTATTAGA TGTTGATGTT
CTAAGTGGTG CTGATGGAGT TTCTTATGTG TATTTAGCTG GAGATGTTAA TTTAACGCTG
GTCGCTCCAA CAGGAAATCT AACAGCGACA ACCTCAGCAG TTGGTGCAAG TAATGCAACT
GCGACGATTC CAACCACCTT AAAAAATAAT GCAGGTACTG ATGTTCCAGT CACCTCAGTC
ATTACTAATT CCTCGGGGAC TCCAGTGACC AACGGTCAAT TATCAGCGGG TACTTACACT
GTCACCTATT CAGCCGCAGG CTATGCAAAT GTAACGCAAA CTTTAGTGGT TACTGACCCA
GCTGATACGA CCCCTCCTGC AGCTCCTATT GTGAGTGGCG TCACAGGAAA TAGCACCAAT
GGCTATACCG TTACAGGAAC TGCCGAACCT AATTCGACTA TTACTATTAA AAATGGTTCT
GGTACAACAG TCGGAACAGG AACAACAGAC GGAAGTGGAA ATTACACAGT GACTCTCCCA
GGCTCAGTTG GTCCTAATGC GCCATTAAAT GTTACAGCGA CAGATAGTTC GGGGAATGTT
AGTACGCCAA CACCAACGAC AACCCCCGCA GACCCAGTTA GTCCAGTACT GGTAGCTCCA
ACAGGAAATC TAACAGCAAC GACCTCAGCA GTTGGTGCAA GTAATGCAAC TGCGACGATT
CCAACTACAT TAAAAAATAG TGCAGGAGCC GATGTAGCGG TCACCTCGGT TATTACCAAT
TCCTCAGGAA CTGCAGTGAC CAATGGTAAC TTATCAGCGG GTACCTACAC CGTCACTTAT
ACGGCTGCAG GATATGAAGA TGTGACCCAA ACGCTGGTTG TCTCTGACCC AGCAGATACA
ACCGCCCCAG ATGCTCCAGT AGTTGGAAGT GTCACAGGAA ATAGCACCAA TGGTTACACC
GTCACAGGGA CTGCCGAACC TAATTCGACC ATCACAATTA AAAATAATAA TGGCGATACG
GTCGGAACCG GAACGACAGA CGGCAGTGGA AATTACACAG TTACCCTCCC AGGCTCAGTT
GGTTCTAATG CTCCACTAAA TGTCACAGCG ACAGATAGTT CAGGCAATGT CAGTGATCCA
ACCTCAGCGA CAACACCAGC AGATCCAGTT AGTCCAGTTT TAGTAGCTCC AACAGGTAAT
TTAACTACGA CCACTTCTAA AAAAGGTGCA GCTGACGCAA CAGCTAGTCT ACCTGCTACA
CTTAAAGATA GTGATGGTAA AACTGTACCT GTTACTCATG TAATTACCAA TTCAACAGGA
ACGGAAGTAC CGAATGGCAA ACTGTCCGCA GGTACTTACA CAGTAACTTA TTCAGCAGAG
GGATATGCAA ATGTAACTCA AACCTTAGTG GTCAGTGATC CAAGCAACCC AACTAGTCCA
GTTTTAGTAG CTCCAACAGG TAATTTAACT ACGACCACTT CTAAAAAAGG TGCAGCTGAC
GCAACAGTTA GTCTACCTGC TACACTTAAA GATAGTGATG GTAAAACTGT ACCGGTTACT
CATGTAATTA CCAATTCAAC AGGAACGGAA GTACCGAATA GCAAACTGTC CGCAGGTACT
TACACAGTAA CTTATTCAGC AGAGGGATAT GCAAATGTAA CCCAAACCTT AGTGGTCAGT
GATCCATCGT CTAACACTGA TACGACGGCT CCAAACGCTC CAACTGTAGA TAGTGTAACT
GGGGATTCTG GTAGTGGATA TACGGTAAAT GGTAAAGGTG AACCTGGTTC CACTATTACT
GTTAAAAATC CGGCAACAGG CGAAGTTTTA GGCACTGCTG TAGCGGGAGT GGATGGAAGT
TATACACTTA AACTTCCTCT TGGAATTAAC CCAGGAACAC AGGTTTCTGT TACTGCAACA
GATGCATCTG GAAATACCAG CGAACCAACG CTCTTTACTA CACCGCCAAC AACAATGAAT
GGAGGGATGA TAAATGGAAA TATGAGTACA AATATAGGTG GAAAACATTT TTCAACAGCT
GATTTACCTG CAACAGGTGA AGCAAATGCA GGTTGGTTGA GTATGGTTGG AACTGTTCTT
CTCTCTCTAT TTGGAGCAAT GTTCTTCTGG CGTAAGAAAA ATAAAGAAGA TAAACCTTAA
|
|---|
| Protein sequence | MEMQKKKAPR KKGKVITKRK ILSATMSGTL LMTSVIIPTA YSLLSNQITA KAAALNIDLL
QNITSSNNSG TTTSNRWASG SGTRNVDFTI AGGALANVAL LSGPRYAVLT IPQELRGFVA
ANGNTSVTTN ITIDFNKVAL INAIVSAGDT FVAGVATILG NNPLASINLT EVTTQLNLLK
GSQNIGGGTF TSATTLNGNS VLSAPLNDGM GAILAQNVRT ILENLRTAVS NLSATGLAAP
AANTALALIK PALITAIDNV LVPLVNGTGG ILDLLLNASA LGNTRITIPT KITAPPSIQS
NLDARFVGSA VQTNLLDVDV LSGADGVSYV YLAGDVNLTL VAPTGNLTAT TSAVGASNAT
ATIPTTLKNN AGTDVPVTSV ITNSSGTPVT NGQLSAGTYT VTYSAAGYAN VTQTLVVTDP
ADTTPPAAPI VSGVTGNSTN GYTVTGTAEP NSTITIKNGS GTTVGTGTTD GSGNYTVTLP
GSVGPNAPLN VTATDSSGNV STPTPTTTPA DPVSPVLVAP TGNLTATTSA VGASNATATI
PTTLKNSAGA DVAVTSVITN SSGTAVTNGN LSAGTYTVTY TAAGYEDVTQ TLVVSDPADT
TAPDAPVVGS VTGNSTNGYT VTGTAEPNST ITIKNNNGDT VGTGTTDGSG NYTVTLPGSV
GSNAPLNVTA TDSSGNVSDP TSATTPADPV SPVLVAPTGN LTTTTSKKGA ADATASLPAT
LKDSDGKTVP VTHVITNSTG TEVPNGKLSA GTYTVTYSAE GYANVTQTLV VSDPSNPTSP
VLVAPTGNLT TTTSKKGAAD ATVSLPATLK DSDGKTVPVT HVITNSTGTE VPNSKLSAGT
YTVTYSAEGY ANVTQTLVVS DPSSNTDTTA PNAPTVDSVT GDSGSGYTVN GKGEPGSTIT
VKNPATGEVL GTAVAGVDGS YTLKLPLGIN PGTQVSVTAT DASGNTSEPT LFTTPPTTMN
GGMINGNMST NIGGKHFSTA DLPATGEANA GWLSMVGTVL LSLFGAMFFW RKKNKEDKP
|
|---|
| |