| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1393 |
|---|
| Symbol | |
|---|
| ID | 4433172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1303796 |
|---|
| End bp | 1305046 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639667122 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_809332 |
|---|
| Protein GI | 116512116 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3591] V8-like Glu-specific endopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.040019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATA AAACAATTAA ATTCTATCTA CTTACCTCAG CGTTACTTTT ATTTTCTCCA
AATGTTCTAG CAGATAGCCA ACCATTTATA CCTGCAGGTG GTATTTCCGC TAGCAATGTT
TATCAGCCAG ATGGACGAAA AATGATAACA AGTGCTAATC AATTTCCTTA CAATACAATT
GTATATATTG TAACAGTTGG TGGAAATGGA ACAGTCTATT ATAGCAGTGG AGTAATTATT
GCTCCTAATA CAGTATTAAC AGCGGATCAT GTAATTTACA ATAGACCCAA TGGTGGTTAT
ATTAAATCTG CAACGGTTTA TCAAGCCAAC GCAAACGGGA CATACAATTC TAATACAGCT
GCTACAGTAA CGGGAAAAGT TGCAAACCCA GATTGGTTGG CAAAAGACTC ATTGATTACT
AATGGATATC CAAGCAATAA TGCAGATGAT TTAGGAATTC TTAATCTTTC AAAAAATATA
GGGTTATCTA CAGGTTGGAT GGGAATGACA TCGACTCTTT CAACTAATCA GACTATCTCT
TTGGTCGGTT TTCCAGGAGA CCATGCGGGT CAAATGTGGG GAATGTCTGG TAATATTTCT
CAAATTAGCA ATCCCTTGTT TAACTACTCT AATATCAGTG AGTTCCCCGG ACAAAGTGGT
AGTCCTATCT TCAATACAAG TAATAATATT GTAGGGATTA ATGTTGCTGA CGCGAACTAT
CCTAATAATA CTAACCCTAC TCACTATGTC CCCTCATCCC TCGCTTCGCA ATATCCCAAC
TACGGTGTTC AACTCACCGC AAGCAACATT AATTGGATTC AAAATAATGT ACCAGCACTA
AAATCAACAG CATTATATCG TGTTTATAAC CCAAACAATG GCGAACATCT CTATACAAAA
AGTTTGTATG AAACGACGAC TTTATCAAAA ACAGGCTGGA ATTATGAGGG TGTCAATTCG
CAACAACCAG CGACAGGTAA TGCAGTTTAC CGACTTTATA ACCCTAATTC AGGGGAACAT
TTTTATAAGA CGTCTTCCTT TGAGCGTGAT TCACTAGTCA AAGCAGGTTG GCGTTTTGAA
CAAATCGCTT TTTATTCGGA CACAGCAAAA CACACGCCAA TTTATCGGCT TTTTAATCCT
AATGCCAAAG GTAAACAAAT CAGTCATTTT TATACATCAA GTTGCGCAGA ACGAGATTCA
CTTGTGAAGA TTGGTTGGAG ATATGAGCAA ATTAGTTGGT ATGGACTTTA G
|
|---|
| Protein sequence | MMNKTIKFYL LTSALLLFSP NVLADSQPFI PAGGISASNV YQPDGRKMIT SANQFPYNTI
VYIVTVGGNG TVYYSSGVII APNTVLTADH VIYNRPNGGY IKSATVYQAN ANGTYNSNTA
ATVTGKVANP DWLAKDSLIT NGYPSNNADD LGILNLSKNI GLSTGWMGMT STLSTNQTIS
LVGFPGDHAG QMWGMSGNIS QISNPLFNYS NISEFPGQSG SPIFNTSNNI VGINVADANY
PNNTNPTHYV PSSLASQYPN YGVQLTASNI NWIQNNVPAL KSTALYRVYN PNNGEHLYTK
SLYETTTLSK TGWNYEGVNS QQPATGNAVY RLYNPNSGEH FYKTSSFERD SLVKAGWRFE
QIAFYSDTAK HTPIYRLFNP NAKGKQISHF YTSSCAERDS LVKIGWRYEQ ISWYGL
|
|---|
| |