Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1287 |
Symbol | |
ID | 4432323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 1195208 |
End bp | 1196275 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639667027 |
Product | spermidine/putrescine-binding periplasmic protein |
Protein accession | YP_809237 |
Protein GI | 116512021 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.180605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAT TATTATACTT TTTTGTTGGA ATTCTGGTCA TTACTGCTTC ACTAGGACTG ATTACCAATA GAATGAAAGC TGCTGACGGA GTCAAAACTC AGAATAATAG CTTGACAATT TTCAACTGGG GTGAATATAT CGATCCAGAC TTGATTAGTA GATTTCAGAA AGAAACAGGT TATAAAGTTA ACTATATGAC TTTTGATTCC AATGAAGCCA TGTATTCAAA AGTCAAACAA GGAGGAACAG CTTACGACCT GATTGTTCCT TCTGATTACA TGATTGAAAA AATGGCCAAA GAAAATCTGC TCCTTAAGCT AGACCACAGC AAAATTAAAG GTTTAAAAGA CGATGACCCT AAACTACTTA ATCCAGCTTT CGACCAAGGA AATCAATATT CTGTTCCATA CTTTTGGGGA ACATTAGGCA TAGTTTATAA CTCAAAAACA GTAAAAACTC CTCCAAAAAC GTGGAATGAT ATCTGGTCAC CAACTTACAA AAACTCGATT TTACTGACAG ACAGTGTGCG TGACGTCATG GCAATGGTTC TTAGTAAACA TGGCTATTCA TTAAATACAA CCAACCAAAA AGAGTTAGAC ATAGCCTATC AAGGCCTCCT TAAGTTTACG CCAAATGTAA AAGCAATTTT GGGCGATGAA ATCATGAATT ACATGATTAA TAATGAGACA CCTTTAGCCG TTGTTTATAG CGGAGAAGCA GCAGAGATGA CCTCTGAAAA TAAAAATTTG AAATATGTCA TCCCTGAACG TACAAATATT TGGTATGATA ATTTAGCCAT TCCGAAAACA GCAAAAAATG TCAAAGCAGC TTACGCTTTT ATTAATTTCA TGCAGGAACC CAAAAATGCA GCTCAAAATG CAGAGTGGAT TGGTTATGCA ACTCCGAACT TGAAAGCAAA AGCTCTCTTA CCCAAAGAAA TTCGTGATAA TAAATCGTTT TACCCAGATG AAGCAACTAT CAAAGATGAT GAAGCTTACA AAAACCTTAG TCCATATTGG ACTGGAATTT ATAATGATTT GTATTTAGAA TTTAAGATGA ATAAATAA
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Protein sequence | MKKLLYFFVG ILVITASLGL ITNRMKAADG VKTQNNSLTI FNWGEYIDPD LISRFQKETG YKVNYMTFDS NEAMYSKVKQ GGTAYDLIVP SDYMIEKMAK ENLLLKLDHS KIKGLKDDDP KLLNPAFDQG NQYSVPYFWG TLGIVYNSKT VKTPPKTWND IWSPTYKNSI LLTDSVRDVM AMVLSKHGYS LNTTNQKELD IAYQGLLKFT PNVKAILGDE IMNYMINNET PLAVVYSGEA AEMTSENKNL KYVIPERTNI WYDNLAIPKT AKNVKAAYAF INFMQEPKNA AQNAEWIGYA TPNLKAKALL PKEIRDNKSF YPDEATIKDD EAYKNLSPYW TGIYNDLYLE FKMNK
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