Gene LACR_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1275 
Symbol 
ID4432311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp1182988 
End bp1184037 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content34% 
IMG OID639667015 
ProductGTP cyclohydrolase 
Protein accessionYP_809225 
Protein GI116512009 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I
[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I
[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAA CTTATTTAAG CATGGGAAGT AATATTGGGG ACCGTCAGTA TTATTTACAT 
GAAGCCATTC GTTTATTGGG AAAACACCCG AAAATTATGA TTGAAAAAGT ATCAAATTTT 
TATGAAAGTT CTCCAGTTGG TGGCGTCAAA CAAGATGATT TTACAAATTT AGCTTTAAAG 
GTGGCCACAC TACTTGAACC CTTAGAATTA TTAGATTTTA TTCATGAAGT TGAACTTTCT 
TTAAATCGTG AGCGAAAAAT TCACTGGGGA CCAAGAACAA TTGATATTGA TATTATTTTC 
TATGGAGATT CAGAAATTCA AGAAGAAAAT TTGATTGTTC CACATAAAGA AGCTTTTAAT 
CGTTTATTTG TTTTAAAGCC TATATTTGAG CTTTTAAGCA ATGATTTTAA GTATTATGAG 
CCAATTCGCG AGGCAATTGC TAAACTTTCA GAAAGCGAGC AAGAACTGCA TGTGATTGAA 
GAAGAAAAGT CTCCAAAAAG TCGTATTGAA GAGGCGGTCA AAGAAATTCT TTTTGCAGTG 
GGTGAGGATC CAAATCGAGA GGGATTGCTT GAAACTCCTG CCAGAGTAGC TAAAATGTAT 
GAACAAATTC TTTCATCACA ACGTTTGACA AACTTTAATG AATACAAACT TTTTGAAATT 
GATTCTTCTA AGAATGATTC AATTGTGCTG ATTAAAGATA TTCCATTTTA TTCAATGTGT 
GAGCATCACA TGCTACCATT CTTTGGAAAG GCTCATGTTG CTTATATTCC TGATGGTGGA 
CGCATCATTG GATTATCGAA AATTCCTCGT TTAGTTAATT ATGTTTCTCG TAAACTTTCG 
GTGCAAGAAA ATATTACTCA TGATATTGCC GATATTTTGA CGAATATTTT AAAACCCAAA 
GGAGTGGCTG TTCTTGTTGA GGGACGTCAC ATGTGCGTGG AAATGCGCGG AGTGAAAAAA 
GTAAATTCGT TGACCAAAAC TTCTTATTTC TTAGGTGAAT TTAAAGAAAA CAGCGAAAAA 
AGAATGGAAT TTTTAGAAAG TCTTTTATGA
 
Protein sequence
MQTTYLSMGS NIGDRQYYLH EAIRLLGKHP KIMIEKVSNF YESSPVGGVK QDDFTNLALK 
VATLLEPLEL LDFIHEVELS LNRERKIHWG PRTIDIDIIF YGDSEIQEEN LIVPHKEAFN 
RLFVLKPIFE LLSNDFKYYE PIREAIAKLS ESEQELHVIE EEKSPKSRIE EAVKEILFAV 
GEDPNREGLL ETPARVAKMY EQILSSQRLT NFNEYKLFEI DSSKNDSIVL IKDIPFYSMC 
EHHMLPFFGK AHVAYIPDGG RIIGLSKIPR LVNYVSRKLS VQENITHDIA DILTNILKPK 
GVAVLVEGRH MCVEMRGVKK VNSLTKTSYF LGEFKENSEK RMEFLESLL