Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1218 |
Symbol | |
ID | 4433676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 1133608 |
End bp | 1134360 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639666961 |
Product | sortase (surface protein transpeptidase) |
Protein accession | YP_809171 |
Protein GI | 116511955 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000016214 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGC GCACAAAAAA TAAAAATAAA AAAAGAAAGT ACAACTGGCT TTTAAATACA TTCATTGTCC TATTATTTAT TGTGGGCTTA GTATTAATTT TTAATAAACC TATTCGAAAT ATGATGATTG CCACAAAGAG TAATCATTAT CAACTTCAAA ATGTTTCAAA AGAAAAAATT GAAAAAAATA AAAAAGCTGA TGTGAGTTTT GATTTCGCAG CAGTAAAATC AGTTGATTTC CAATCCGTGC TTTCCAATCA GTTTGATAGC CAACCTTTAC CAGTAATTGG GGGGATTGCA ATCCCCGAAT TGAATATTAA TCTTCCTATT TTTAAAGGAG TTGGAAATAC TTCACTTTTA TATGGGGCCG GAACCATGAA AGGTGATCAA GTGATGGGTG AAGGAAATTA TACTCTTGCG GGTCACAATA TGACTGGTTT CACTTCAGAC TTATCAATAT TATTTACTCC TTTAGAAAAA GCAAAAGCGG GAATGTCCAT TTATGTTACT GACAAAAATA ATGTTTATCA GTATAAAATT GATAAAATTG ATGTGGTAAC GCCAGAACAT GTTGAAGTTT TAAATGATAC TCCGGGTAAA AAAGAAATCA CTTTGGTAAC TTGTGCTGAT GCCGAAGCCA CACATCGGAT TATTGTTCAT GGAACATTTG TTGATGAGAA GGCATATGAT AAAGTGACAG ATTCTGTGAA AAATGCTTTT GAGAAAAAAT ATAATCAAAT CAATAATTTC TAA
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Protein sequence | MEERTKNKNK KRKYNWLLNT FIVLLFIVGL VLIFNKPIRN MMIATKSNHY QLQNVSKEKI EKNKKADVSF DFAAVKSVDF QSVLSNQFDS QPLPVIGGIA IPELNINLPI FKGVGNTSLL YGAGTMKGDQ VMGEGNYTLA GHNMTGFTSD LSILFTPLEK AKAGMSIYVT DKNNVYQYKI DKIDVVTPEH VEVLNDTPGK KEITLVTCAD AEATHRIIVH GTFVDEKAYD KVTDSVKNAF EKKYNQINNF
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