| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1208 |
|---|
| Symbol | |
|---|
| ID | 4433666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1121050 |
|---|
| End bp | 1122399 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639666952 |
|---|
| Product | UDP-N-acetylmuramyl tripeptide synthase |
|---|
| Protein accession | YP_809162 |
|---|
| Protein GI | 116511946 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.970096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAA AAACTTCATT TGCAAAGTTT GCTGGTAATT CATCGCGCTT TGTCTTGGAA
AAATTTTTCA AGCGTGGCTC AACTTTACCA GGAAAAATTG CTTTAAAATT TGACCCTGAA
ATTCTTAAAT CACTGACCAA AAATTATGAA ATCATTGTTG TGACTGGGAC CAATGGAAAA
ACATTGACCA CAGCTTTGAC CGTGGGAATT TTAGAAAAGG CTTTTGGACC AGTTGTGACA
AATCCAACTG GAGCCAATAT GATCACGGGG ATTGTATCTA CCTTTTTGAA AGCTCCCAAA
GCGAAAACTG GCGAAAAGAA ATTTGCTGTC CTTGAGATTG ATGAAGCGAG TTTGCCAAAA
ATCACTGAAT ACATCAAACC TTCATTATTT GTTTTCACAA ATATTTTCCG TGACCAAATG
GACCGCTATG GAGAGATTTA CACCACCTAC GATTTAATCG TCAAAGGTGC GGCAAATAGC
CCTAAAGGTA CTGTTTTATT AAATGGTGAT AGTCCACTTT TCAACTCAAA AAAATTAGTT
AATCCTGTAA AATATTATGG CTTTAACCAC GAAAGTCATG AAGCTACTCA TGCTCATTAC
AATACCGAGG GGATTGTTTG TCCAGTTTGT CATCATATTT TGGCTTACAA GATGAACACC
TATGCTAACT TGGGAAATTA TATTTGTGAA AATTGTGGCT TTAGTCGTCC AGAATTAGAT
TATCAACTGA CAGAATTATC CGAGATTACA AATACTTCTT CTAAATTTAT CATTGATGGG
ACAGATTATA AAATCAATGT CGGTGGACTT TATAACATCT ACAATGCCCT TGCTGCTGTC
TCTGTTGCTG AATATTTCAA TGTGCCAAAA GAAACAATTG CGGCTGGTTT TGAACTTTCC
AAAGCAGTTT TTGGTCGTCA AGAAACTCTT GAAATCGATG GAAAAAAAGT AACCATTGTT
TTGATAAAAA ATCCAGTAGG TGCGAATCAA GCCCTTGAAA TGATGAAATT AGCCAATTAT
CCTTTCACTT TAGTTAGCCT TTTGAATGCC AATTATGCTG ACGGAATTGA CACAAGTTGG
ATTTGGGATG CTAATTTTGA ATTAATTAAT GACATGGAAA TTGACCAAAT TATCACAGGC
GGTGTTCGTT CATCTGAAAT GGCTAGACGT ATGCGAGTGA CTGGATTTGA TGCCCAAAAG
ATTTCCGAGC GTAAAGAACT TTCAGAAGTA TTAGAGGCAA TCAAAGAAAG TAAAAAAGAT
CATGTCTATA TTTTGGCAAC TTATACTGCC ATGTTGCAAA TGCGTGAACT ACTGGCTGAA
AGTCATTATC TTGGAAAGGA AATGCGTTAA
|
|---|
| Protein sequence | MTIKTSFAKF AGNSSRFVLE KFFKRGSTLP GKIALKFDPE ILKSLTKNYE IIVVTGTNGK
TLTTALTVGI LEKAFGPVVT NPTGANMITG IVSTFLKAPK AKTGEKKFAV LEIDEASLPK
ITEYIKPSLF VFTNIFRDQM DRYGEIYTTY DLIVKGAANS PKGTVLLNGD SPLFNSKKLV
NPVKYYGFNH ESHEATHAHY NTEGIVCPVC HHILAYKMNT YANLGNYICE NCGFSRPELD
YQLTELSEIT NTSSKFIIDG TDYKINVGGL YNIYNALAAV SVAEYFNVPK ETIAAGFELS
KAVFGRQETL EIDGKKVTIV LIKNPVGANQ ALEMMKLANY PFTLVSLLNA NYADGIDTSW
IWDANFELIN DMEIDQIITG GVRSSEMARR MRVTGFDAQK ISERKELSEV LEAIKESKKD
HVYILATYTA MLQMRELLAE SHYLGKEMR
|
|---|
| |