Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1172 |
Symbol | |
ID | 4432449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 1088913 |
End bp | 1089569 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639666918 |
Product | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | YP_809128 |
Protein GI | 116511912 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0261583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAGTA AAAAAAGATA TCTTGAAGCT TTAGCAATCA TTGAAGAAAT GTTTCCCCAA GCACATGGAG AACTGGTTTG GGAGACGCCT TTTCAACTAT TGATTGCGAC AATTTTATCT GCTCAAGCAA CTGACAAAGG AGTCAATAAG GCGACGCCGG CACTTTTTGC TGCTTTTCCG GATGCTCAAA CCATGTCACA AGCTAAAGTA GAAGAGATTG AAGCGTTGAT TCGAACAATC GGTCTTTATA AAACTAAAGC TAAAAATATT CTGCGAACTT CACAAATGTT AGTGGCGGAC TTCGGAGGGA TTTTACCGGA CTTGCCGAAA GATAAAAAGC TTTTACAGAC TCTACCTGGA GTCGGGCGAA AAACGGCTAA TGTTGTTCTA GCGGAAGCTT ATGGAATCCC AGGGATTGCG GTTGATACAC ATGTTGAGCG AGTTTCTAAG CGATTGGATA TTGTTGCGCA AAAAGCGACT GTTTTAGAAG TTGAAGAAAA ACTGATGAAG TTGATTCCTG AAGATAAATG GGTTCAATCT CATCATCACT TGATTTTCTT TGGTCGCTAT CATTGTACAG CGAAAAAGCC TAAGTGTGCA GGTTGCCCCG TATTAGATTA TTGTAAATTT GGAAAGAAAT ATTTAGAAAA TGAATGA
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Protein sequence | MLSKKRYLEA LAIIEEMFPQ AHGELVWETP FQLLIATILS AQATDKGVNK ATPALFAAFP DAQTMSQAKV EEIEALIRTI GLYKTKAKNI LRTSQMLVAD FGGILPDLPK DKKLLQTLPG VGRKTANVVL AEAYGIPGIA VDTHVERVSK RLDIVAQKAT VLEVEEKLMK LIPEDKWVQS HHHLIFFGRY HCTAKKPKCA GCPVLDYCKF GKKYLENE
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