Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0876 |
Symbol | |
ID | 4433309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 816480 |
End bp | 817235 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639666637 |
Product | transcriptional regulator |
Protein accession | YP_808848 |
Protein GI | 116511632 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0549202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATT TCTTACCTGA GCAAGTACGT ACGCTCAATG AACTAGAAAC TGCGGCTTTC AACTTCATCC TATCTAATTT ATCAACTATC GATAAAATGT CAGTCAGACA ACTTGCACAA GCAGTTCATG TTTCGACTGC AACAGTCATG CGAATGACTA GAAAACTTGG CTTTGAAGGT TGGGTAGAAT TAAAGTATTA TCTCAAAAAT CAAAATCAAT TATCAGAAAT TCCAGTTAAT TATTATGAAA ATTTATTGCA ACTCGATCTG TTTTTACGAA AAATAACCTC TAAGGAAGCG GGGATAAAAC TTGAAGAAGC TGTTAAACTA ATTCGTGAAG CTCGCTATAT TATCTTTATT GGAGTGGGTT CATCTGGCGC TTTAGCTGAA TATGGAGCTC GTTATTTTAC AAACATTGGC CTGGAATCTT ACGCCATTTC TGACCCTTAT CAAGCCGTCA AAGGAAAAGG GGCGCCAGAC GTTTTAAGCA TCGTCTTATC AGCTTCTGGT GAAACTGATA AAATTATTGA ACGAGTCGTT AAACTAAGAG AGGAAGCCTC CGCAAAGATT GTTTCAATTA CTAATCATCC AGAAACAACA TTATCCAAAC TTTCAAATAT CAATCTGACT TATGGCTTTC AAACGGAATA TTCTGCCTAT GACCCTCTTG AAAATTTGAC ATCACAACTG CCTGTCATTG CTTTTATTGA AATTTTGGCC CATCAAGCAA TAGAAAAAAG TGATAATCGT AACTAA
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Protein sequence | MIDFLPEQVR TLNELETAAF NFILSNLSTI DKMSVRQLAQ AVHVSTATVM RMTRKLGFEG WVELKYYLKN QNQLSEIPVN YYENLLQLDL FLRKITSKEA GIKLEEAVKL IREARYIIFI GVGSSGALAE YGARYFTNIG LESYAISDPY QAVKGKGAPD VLSIVLSASG ETDKIIERVV KLREEASAKI VSITNHPETT LSKLSNINLT YGFQTEYSAY DPLENLTSQL PVIAFIEILA HQAIEKSDNR N
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