| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0726 |
|---|
| Symbol | glgA |
|---|
| ID | 4432807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 671646 |
|---|
| End bp | 673124 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639666497 |
|---|
| Product | glycogen synthase |
|---|
| Protein accession | YP_808709 |
|---|
| Protein GI | 116511493 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTA GAGAAATGAA AAGAGAAAAA ATGAAAGTTT TATTTGCGTC AAGTGAGTGT
GCTCCCTTTT TCAAAACGGG AGGACTTGGT GATGTAGCGG GAGCACTTCC AAAAGAGTTG
GCTAAGAAAA GTGAGATTTC TTCAGTTGGT GTGATTTTAC CTTATTTCAA AAATGAAATG
AAAGAAGAAT ATCGTTCACT ACTCGTCGAT GAATTTTATG ATTTTGTTGA TTTAGGTTGG
CGGCATGAAT ATTTTGGAGT TAAAACCTTA CTAAAAGATA ATGTTAAATA TTATTTTTTA
GATAATGAGC ATTATTTTGG TCGAGGGCAG CTTTACGGTT ATGGTGATGA TGGAGAACGT
TTTGCCTTTT TTGATTTAGC CGTTTGTCAG CTCTTAGAAA AATTAGATTT TATTCCTGAC
ATTTTGCATG TAAATGACTG GCAAACAGCC ATGATTCCAT TTTTACTTAA AGAAAAATAT
AAGTGGATTA ACGCTTATTC CGATATACAG TCAGTTTTGA CTATTCATAA TATAGAATTT
CAAGGTGTGA TGCAAGGAGA TGCCCTGACA GAACTATTCG GAATGGGAAT GGAACGATAT
TTTGAAGGGG TTGTTCGCCA TAATGGAATG CTAAATATGT TGAAAACAGG TATTTTGTAT
GCAGACCGGG TTAACACTGT CTCGCCTACG TATGCAAAGG AAATTCAAAC ATCAGAATTT
GGTGGTGGAT TGGAAGGCGT TTTGCAGTAT GTGAAAGGAA AGATTTCTGG GATTTTAAAT
GGGATTGATT ATGAGATTTA TGACCCAGAA AAAGATAAAC AAATCTCATA TCATTTCAAT
TCACTGGACC TTACAGGCAA AGCAAAGATG AAGGCAGAAT TACAAAAAAG AGTATTTTTA
CCGATAAACC CTGATATTCC AGTAATTGGT ATGGTTTCAC GATTAACCAA TCAAAAAGGA
TTTGATTTAG TGTTAAGCCA ATTGGAAGAG CTTTTGAAAG AAGAGGTTCA AATTGTCTTA
CTAGGAACAG GTTTTCCAGA ACTAGAAGAA GGATTTAAAT ATTTCGCACA AAAGTATCCT
GATAAACTGT CGGCGAATAT TGCTTTTGAT TTGCAATTTG CTCAAGAAAT ATATGCTGGT
TCAGATTTAT TTTTGATGCC ATCGGCTTTT GAACCCTGTG GTTTATCTCA AATGATTGCT
ATGAGATATG GAACTTTACC GATTGTCCAC GAGATTGGCG GACTAAGAGA TACCGTAGTT
CCATTCAATC CTGTTACGAA AGAGGGGACT GGTTTTGGTT TTGGTTTTAT AGATTTTGAC
AGAGATATTT TATTAGAAAC GATTAAACGT GCACTAGAAG TTTATAAAAA GGAGCCAAAG
ACTTTAAACC GGATAATTGT ATCCGCAATG GAACAAGATT TTTCGTGGGA AACGAAAGCA
CAGCAATACA TTGAACTTTA TCAAACAATA TTAAAGTAA
|
|---|
| Protein sequence | MAIREMKREK MKVLFASSEC APFFKTGGLG DVAGALPKEL AKKSEISSVG VILPYFKNEM
KEEYRSLLVD EFYDFVDLGW RHEYFGVKTL LKDNVKYYFL DNEHYFGRGQ LYGYGDDGER
FAFFDLAVCQ LLEKLDFIPD ILHVNDWQTA MIPFLLKEKY KWINAYSDIQ SVLTIHNIEF
QGVMQGDALT ELFGMGMERY FEGVVRHNGM LNMLKTGILY ADRVNTVSPT YAKEIQTSEF
GGGLEGVLQY VKGKISGILN GIDYEIYDPE KDKQISYHFN SLDLTGKAKM KAELQKRVFL
PINPDIPVIG MVSRLTNQKG FDLVLSQLEE LLKEEVQIVL LGTGFPELEE GFKYFAQKYP
DKLSANIAFD LQFAQEIYAG SDLFLMPSAF EPCGLSQMIA MRYGTLPIVH EIGGLRDTVV
PFNPVTKEGT GFGFGFIDFD RDILLETIKR ALEVYKKEPK TLNRIIVSAM EQDFSWETKA
QQYIELYQTI LK
|
|---|
| |