Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0693 |
Symbol | |
ID | 4433605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 634937 |
End bp | 636154 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639666468 |
Product | major facilitator superfamily permease |
Protein accession | YP_808680 |
Protein GI | 116511464 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.883245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATCACA CGAAAACAGT TAATTGGAAA AGGAATTTAT TTATAACATG GATTGGCTGC TTTTTTGTAG GTTCTTCATT TTCACTAGTG ATGCCCTTTT TGCCTTTGTA CATACAAGGA TTGGGCGTAA GTGGTGGGAA TGTTGAACTT TACTCAGGGT TAGCTTTTTC TTTGCCAGCA TTAGCTTCTG GTCTTGTTGC CCCGATTTGG GGACGTTTAG CTGATGAACA TGGTCGTAAA GTGATGATGG TAAGAGCTAG TATCGTCATG ACTTTGACCA TGGGAGGAAT CGCATTTGTT CCCAATGTTT GGTGGTTACT TGGCCTTCGC CTACTGATGG GATTTTTCTC AGGCTATATT CCTAACTCGA CTGCCATGAT TGCCTCACAA GCTCCAAAAG ATAAATCAGG CTATGCACTT GGAACCTTAG CTACTGCAAT GGTTTCTGGA ACATTGATTG GGCCATCACT TGGTGGATTA TTAGCCGAGT GGTTTGGAAT GGCAAATGTC TTTTTGATTG TAGGGGCTTT ATTAGCACTA GCAACTTTAC TGACTATCTT TTTTGTTCAT GAAAACTTTG AGCCGATTGC AAAAGGTGAA ATGTTGTCTA GCAGGGAAAT TATCAATAAA GTAAGTAATA AACAAATTCT TTTTGGTTTA TTGGTTACAA CATTTATTAT TCAAATCACC TCACAATCTA TTGAACCATT CGTTACTTTA TATATTAAAA CGCTGACAAC AAGCACTAAT AATCTGATGT TTATTTCAGG TCTAATTGTC TCTGCAGTGG GCTTATCAGC AATGATATCC TCAAGTTTTT TGGGTCGTTT AGGTGATAAA TATGGGTCAC ATCGATTGAT CTTGATTGGT TTGGTTTTCA CATTTGTTAT TTACTTGCCA ATGGCTTTTG TGCAAAGTCC ATTACAACTT GGAATTTTAA GATTCCTTCT TGGCTTTGGT ACGGGGGCTT TGATGCCATC AGTAAATTCT CTACTTTCAA AAATTACGCC AAAAGAAGGA GTTAGTCGAA TTTTTGCTTA TGCACAAATG TGCTCAAATC TCGGAATGGT CACCGGTCCC TTGGTTGGTT CAGCCATTGC TGGGTACATT AGTTATCGAG CAGCCATTGT CGGGACAAGC CTATTTGTCA TTGTCAATAT CATCTGGTCA TTTATTAACT TCCGAAAATA TTTACGGAAA CGGAGTATTA TGGAATGA
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Protein sequence | MNHTKTVNWK RNLFITWIGC FFVGSSFSLV MPFLPLYIQG LGVSGGNVEL YSGLAFSLPA LASGLVAPIW GRLADEHGRK VMMVRASIVM TLTMGGIAFV PNVWWLLGLR LLMGFFSGYI PNSTAMIASQ APKDKSGYAL GTLATAMVSG TLIGPSLGGL LAEWFGMANV FLIVGALLAL ATLLTIFFVH ENFEPIAKGE MLSSREIINK VSNKQILFGL LVTTFIIQIT SQSIEPFVTL YIKTLTTSTN NLMFISGLIV SAVGLSAMIS SSFLGRLGDK YGSHRLILIG LVFTFVIYLP MAFVQSPLQL GILRFLLGFG TGALMPSVNS LLSKITPKEG VSRIFAYAQM CSNLGMVTGP LVGSAIAGYI SYRAAIVGTS LFVIVNIIWS FINFRKYLRK RSIME
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