Gene LACR_0543 details

Gene Information

• Locus tag: LACR_0543
• Symbol: recU
• ID: 4433661
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: -
• Start bp: 510409
• End bp: 511050
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 639666326
• Product: Holliday junction-specific endonuclease
• Protein accession: YP_808558
• Protein GI: 116511342
• COG category: [R] General function prediction only
• COG ID: [COG3331] Penicillin-binding protein-related factor A, putative recombinase
• TIGRFAM ID: [TIGR00648] recombination protein U

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAATT ATCCTAATGG AAGGTCGCAG TCTTATAGCG CTGTTCCTAA AAAACAAAAA 
ACACTGACAG AGCTGTCAGT AGCTAAAAAG AGTGCTCCAA AATCTAAAAG TCTTGTTGCT 
TTCGGAAAGC GAGGGATGAA TTTTGAAGCA GAAATCAATG CAACAAATGA TTACTATCTC 
TCACGCGGTC TTGCCGTTAT TCATAAAAAA CCAACACCGA TACAGATTGT TAAAGTAGAC 
TATCCACAAC GAAGTCGTGC AAAAATTACA GAAGCTTATT TTAGACAAGC CTCTACGACT 
GACTATTCTG GAGTCTATAA AGGTCATTAT GTTGATTTTG AAGCAAAAGA AACACACCAA 
AAAACGGTTT TTCCTTTAAA AAATTTCCAT GAACATCAAA TTGTTCACAT GAGTAATGTT 
CTCGCTCAGC GAGGGATTGC TTTTGTATTG TTACATTTTG CGGATCTAGA AGAGACATAT 
CTTCTCCCGT CTTCCTATTT AATTACGTTT TATTACGAAA AAAACGGTTT AAAGTCAATC 
CCACTCGCTT ATATTCGCGA AAATGGCTAT AAAATTGAAA CGAACCACAT TCCTAGGATT 
CCATATCTAG AAATTGTGAA TAAACTTTGT GAGGTACAGT AA 

 

Protein sequence

MVNYPNGRSQ SYSAVPKKQK TLTELSVAKK SAPKSKSLVA FGKRGMNFEA EINATNDYYL 
SRGLAVIHKK PTPIQIVKVD YPQRSRAKIT EAYFRQASTT DYSGVYKGHY VDFEAKETHQ 
KTVFPLKNFH EHQIVHMSNV LAQRGIAFVL LHFADLEETY LLPSSYLITF YYEKNGLKSI 
PLAYIRENGY KIETNHIPRI PYLEIVNKLC EVQ