Gene Ksed_26410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_26410 
Symbol 
ID8374144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2709257 
End bp2709976 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID644992861 
Productprotein-tyrosine-phosphatase 
Protein accessionYP_003150357 
Protein GI256826397 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.121737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA TCGGCACCGC CCAGCAGTAC GAGCACGCGG TGGAGCGACT GGCCAGCGAG 
TTCGACGCCG TGTTCACCCG CGATGAGGTG GCCCGCGAGC TGCACGCCGT CCGCGAGGAC
ATGGAGGCCA CCGCCAGGGT CCGCGACCAC ATCCCGGTGC TGGCCGAGCG CTACGCCAAG
GAGAACCTCC AGGCCCTGGC CCACGCCCGC GGCGCCACGG TCACTGGGCA CCCAGTGGTG
ATGTTCGTCA GCCCGCGCAA CGCCAGCGCC ACCCAGATGG CCGCCGTGAT GACGGACAAG
TACTCCGGCG GCCGCATCCA CGTGCTCTCC GGCGGGGTCC GCCGCGCCGA GGAGATCGCC
CCCGCCGTGA TCCAGGTGAT GCAGGAGCAC GGCATCGACA CCACCACCCT GTACCCGCGC
GCCGTGAACC GTGACGTGCT CCACGCCGCC GACGTGGTGG TGAGCATCGC CAGCCCCGAC
CTGGGCGAGG ACTTCACCGC CAAGCAGCAC ATGGACTGGC ACATCACCCT GGACGAGGAC
GACGTCGAGT CCGTGCGCGC CACCCGCGAC GAGCTCAAGG TCCGCGTGGA CGCGCTGATC
GAGTCCCTCC TGGGCGAGGG TTCCGTCCTT TCGCCCGAGG AGGCCGCCGC CTACCAGGCC
ACCAAGCAGG GCAGCCGCAC CCAAGCCCCC ACCACGGCCC GCGAGGCCCA GCCCGCCTGA
 
Protein sequence
MTIIGTAQQY EHAVERLASE FDAVFTRDEV ARELHAVRED MEATARVRDH IPVLAERYAK 
ENLQALAHAR GATVTGHPVV MFVSPRNASA TQMAAVMTDK YSGGRIHVLS GGVRRAEEIA
PAVIQVMQEH GIDTTTLYPR AVNRDVLHAA DVVVSIASPD LGEDFTAKQH MDWHITLDED
DVESVRATRD ELKVRVDALI ESLLGEGSVL SPEEAAAYQA TKQGSRTQAP TTAREAQPA