Gene Ksed_26380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_26380 
Symbol 
ID8374141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2706602 
End bp2707357 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content72% 
IMG OID644992858 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003150354 
Protein GI256826394 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0843722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACTGC AGGCCTCAGG GCTCACCAAG AGATACGGCA GCAGGACCGC CCTCGATGCG 
GTCGACCTCA CCCTCGAGCC CGGCGTGTTC GGTCTGCTGG GGCCGAACGG AGCGGGCAAG
AGCACGCTGA TGTCGATCCT CGCCACGCAC GTCGCACCGA CCGCCGGTTC GCTGGCCATC
GGGGACCATC GCGTCTTCGA GGGTCAGCGG CCCGGCCCGG GTCTGGAGGG GGCCCGCCGC
CTCATCGGCT ACCTGCCGCA GAAGTTCACG ATCATGAGTT TCTCCAGTGT CCGCCGCAAC
GTGGAGGTCG CGGCGTGGGC GCAGGGGGTC GATGCGGCGG GGGTGCCTGC CGCCGCGAGC
CGTGCTCTGG CACGGGTTGG CCTGGCGGAC CGCGCCGAAT CACGCGCCCG CTCCCTGTCT
GGCGGTATGC GGCAGCGCCT CGGCATCGCC TGTGCCCTCG CCCACGACCC GCAGGTGGTG
CTCTTGGACG AGCCCACCGC GGCTCTGGAC CCGGTGCAGC GAGCCGGGTT GCGCGACGAC
TTGGCTGAGC TGGGGCGCGA TCGCATCGTG GTGGTCACCA CCCACATCGT CGAGGACATC
GCCCACATCG CCCACCGCAC CGTCGTGATG GACCACGGGG CCTTCCGCTT CGACGGCACG
GTGGCCGACC TGGCGGGCCT CGGCGGGGCC GATGCCGTGT CCCCCCTCGA GGCGGGCTAC
CGCGCCGTCC TGGCTGACGC GGTGGCTGCG GCATGA
 
Protein sequence
MQLQASGLTK RYGSRTALDA VDLTLEPGVF GLLGPNGAGK STLMSILATH VAPTAGSLAI 
GDHRVFEGQR PGPGLEGARR LIGYLPQKFT IMSFSSVRRN VEVAAWAQGV DAAGVPAAAS
RALARVGLAD RAESRARSLS GGMRQRLGIA CALAHDPQVV LLDEPTAALD PVQRAGLRDD
LAELGRDRIV VVTTHIVEDI AHIAHRTVVM DHGAFRFDGT VADLAGLGGA DAVSPLEAGY
RAVLADAVAA A