Gene Ksed_24590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24590 
Symbol 
ID8373962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2538919 
End bp2539977 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content74% 
IMG OID644992685 
Productuncharacterized photosystem II stability/assembly factor-like protein 
Protein accessionYP_003150189 
Protein GI256826229 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGC GCACCGCACT CGCCCTGCTC ACCGCCGCCG TGCTCACCGC GGCGCCGACC 
GCCACCGCTG CTCCCCCCGG CCCGGAGCTG GACTGGCGGA CCAGCGTCAC CGACAGCGAC
CAGAACCTCC GCGGCCTCGA TGCGGTGAGC GCCTCCGAGG CGTGGGTCAG TGGTGAGTCC
CGCAGTGGGG GCGCCGCCGG CATCTTCCAC ACCACGGACG GGGGCCGCAG CTGGCAGGAC
GTCACCCCGC CCGGTACCGA GGGGCTGAGC CTGCGGGACG TCGAGGTGGT CGGTGGCGCG
GTGCACGTCC TGGCGATCGG GCCCGGCGAG GACTCCCGCA TCCTGCGGAC CACCGACGAG
GGAGCCACCT GGCAGGAGAC CTTCCGCAAC GACGACCCCG CCGCCTTCTA CAACTGCATG
GCCTTCTACC CCGACGGTCG CCGCGGCCTC GCCGTGAGCG ACCCGGTGGA CGGCCGGATC
CAGCTGGTGG CCACCGACGA CGGGGGCCGC ACCTGGGAGG TGCTGCCCGG CACCGGGATG
GTTCCCACTG AGGGTGAGGC CCAGTTCTCG TCCAGCGGCG ACTGCCTGAC CGTCTCTGCC
GACCGCGCCC ACATCGTGAC CGGGGGCGCG AGCTCGCGCG TGCTGACCTC CACGGACCAC
GGCCTGACGT GGACGGCGCG GGGCAGCGCC CTGCGCGCCG GGGACGCAGC GGGGGCCTTC
GCTGCCTCGT TCACCGGACG GCACGGCATC GTGGTGGGAG GGGACTTCGA CGACCCGGCG
AACACCCGCC AGACCACGGC CCGCTCACAC GCTGGTGGGG CCTGGCGGTC CGGTGAGGAC
CTGACGCACG TGGGTGAGGA CGTGGCCCAC GTACGGGGCA GTCGCCTTGC CCTGGCCACC
GGCGACTACC GGGGCTCGGA GGGGACCAGC CTCACCCGGG ACGGCGGGAA GAGCTGGGAG
CGGGTGACCG ACCAGGGCTT CCACACCCTG GACTGCACGC CCGGAGGCAC CTGCTGGGGC
GCCGGCAGTG AGGGCATGGT CGGCACGCTG CGCAGCTGA
 
Protein sequence
MTKRTALALL TAAVLTAAPT ATAAPPGPEL DWRTSVTDSD QNLRGLDAVS ASEAWVSGES 
RSGGAAGIFH TTDGGRSWQD VTPPGTEGLS LRDVEVVGGA VHVLAIGPGE DSRILRTTDE
GATWQETFRN DDPAAFYNCM AFYPDGRRGL AVSDPVDGRI QLVATDDGGR TWEVLPGTGM
VPTEGEAQFS SSGDCLTVSA DRAHIVTGGA SSRVLTSTDH GLTWTARGSA LRAGDAAGAF
AASFTGRHGI VVGGDFDDPA NTRQTTARSH AGGAWRSGED LTHVGEDVAH VRGSRLALAT
GDYRGSEGTS LTRDGGKSWE RVTDQGFHTL DCTPGGTCWG AGSEGMVGTL RS