Gene Ksed_24550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24550 
Symbol 
ID8373958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2534720 
End bp2536105 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content74% 
IMG OID644992681 
ProductDNA repair protein RadA 
Protein accessionYP_003150185 
Protein GI256826225 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCGA AGAGTGGTGG CAGCAGGTCC CGCGAGCGGG AGTCCTACCG GTGCAGCGAG 
TGCGGGTGGA CCACGGTCAA GTGGATCGGA CGGTGCAAGG AGTGCCAGGC CTGGGGGACC
CTGGTGGAGG CGGGCGGCCG CCCGGCGGGC AGGACCACCC CGGCCGCCTC TGTCCGCGAG
CCCGCCCGCC CCATCGGGGA GGTGGACCTC TCGGCCTCCG AGCACCACGC CACAGGGGTG
GAAGAGTTCG ACCGCGTGCT GGGCGGCGGC ATGGTGCCCG GCGGGGTGGT GCTGGTGGCC
GGGGACCCGG GCATCGGCAA GTCCACCCTG CTGCTGGACG TCGCGGCCCG GGTGGCGGCC
GGGGGCGGCC CCGCCCTGTA CGTCAGCGGT GAGGAGTCCG CGGCCCAGGT GCGCATGCGC
GCCGAGCGGA TCGGCGCCGT CACCGACGGG CTCTACCTGG CCTCCGAAAC CGACCTCGCC
GCCGTGCTGG CCCACCTTGA GGCCGTGCAG CCCCGGCTGG TGGTGTTGGA CTCCGTCCAG
ACCATCAGCT CGCAGGAGGT CGACGGGGCC GCCGGCAACG TGGCCCAGGT GCGGGAGGTC
GCCGCCTCGG TGATCCGTGA GGCCAAGCAC CGGGGGATCG CGACGGTGCT GGTCGGCCAC
GTCACCAAGG AGGGCGCGAT CGCCGGGCCG CGGGTGCTGG AGCACCTCGT GGACGTGGTG
GTGACCTTCG AGGGCGAGCG TCACTCCCGC CTGCGCCTGA TCCGGGCGGT GAAGAACCGC
TTCGGCCCCA CCGACGAGGT GGGCTGCTTC GACCTGGACG AGTCCGGCAT CACCGGGCTG
GCCGACCCCA GCGGGCTGTT CGTCTCACGC CACGCAGCCC CGGTGCCCGG CACCTGCCTG
ACCGTGACCC TGGAGGGCCG CCGTCCGCTG GTGGCCGAGG TGCAGGCGCT GGCCGTCCCG
ACGCAGGCCC CCAGCCCACG GCGGACCACC AGCGGGGTGG ACTCCTCCCG GGTGGCCATG
ACCGTGGCCG TGCTCAACCG GCACGGCGGG GTGCCGCTGG CCACCAGCGA CGTCTACGTC
TCCACCGTCG GCGGCGTGCG CCTCTCGGAG CCGAGCACGG ACCTCGCCGT GGCCCTGGCG
CTGGCCAGCT CGTTGGCGGA CCAAGCACTG CCGGACGGCC TGGTCGCCAT CGGCGAGGTG
GGGCTGGCGG GCGACCTGCG CAATGCGCCC GGCACCGGGC GGCGTCTGGT GGAGGCGCAC
CGCATCGGGT TCGACAAGGC CGTGATCCCC CGGGGGGCCC TGGGCGACCA GCAGGCACCC
GCCGGCATGA AGGTCTTCCA GGCCGACACG CTCGAGCACG CGATCGGAGC GGTGCTCAAG
CGCTGA
 
Protein sequence
MAAKSGGSRS RERESYRCSE CGWTTVKWIG RCKECQAWGT LVEAGGRPAG RTTPAASVRE 
PARPIGEVDL SASEHHATGV EEFDRVLGGG MVPGGVVLVA GDPGIGKSTL LLDVAARVAA
GGGPALYVSG EESAAQVRMR AERIGAVTDG LYLASETDLA AVLAHLEAVQ PRLVVLDSVQ
TISSQEVDGA AGNVAQVREV AASVIREAKH RGIATVLVGH VTKEGAIAGP RVLEHLVDVV
VTFEGERHSR LRLIRAVKNR FGPTDEVGCF DLDESGITGL ADPSGLFVSR HAAPVPGTCL
TVTLEGRRPL VAEVQALAVP TQAPSPRRTT SGVDSSRVAM TVAVLNRHGG VPLATSDVYV
STVGGVRLSE PSTDLAVALA LASSLADQAL PDGLVAIGEV GLAGDLRNAP GTGRRLVEAH
RIGFDKAVIP RGALGDQQAP AGMKVFQADT LEHAIGAVLK R