Gene Ksed_23970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23970 
Symbol 
ID8373900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2479066 
End bp2481690 
Gene Length2625 bp 
Protein Length874 aa 
Translation table11 
GC content76% 
IMG OID644992625 
Producthypothetical protein 
Protein accessionYP_003150129 
Protein GI256826169 
COG category[L] Replication, recombination and repair 
COG ID[COG0419] ATPase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0772565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCC ACGCGCTGGA GGTCAAGGAC TTCCGCGGCA TCGACCACTA CCGCCTGGAG 
GTGCCCGAGG CGGGGGTGCT GGTGGTCGAG GGGCCGAACG AGGCCGGCAA GAGCACGCTG
GTCCGGGCCC TGGACATGCT GCTCACGGAG AAGGCCACGG CCAAGAAGCA GTACGTCAAG
GACACCCAGC CGATCGGTCG CGACGAGGGC CCGACCGTCA CGGCCGAGCT GACCGTGGGT
GGGCAGCGGT TCACCTACGC CAAGCAGTGG GTGAAGGGGC CGCGCACGGA GTTCCGGCCG
CACGGTCCGG GGCAGCCGCT GACGGGTGAC GATGCGCACA ACCACGTGGT CGCCCTGCTG
GACGAGCACG GGGACGAGAC CCTGCGCAAG GCCCTGCAGC TGCTGCAGGA GGGCCCGCTC
GTGGTCGACG GGCTGGGGGA ATCGCGCCGG CTGACCGCTG CGCTCGACGC GGTGGCCGGG
GGAGACACCG GGAAGGACCT CGACCAGGCG GCCAGCCTGG TGGAGCGGGT CGAGTCCGAT
GCGGGGGTCT ACTGGACGGC GGGTGGCCGG GAGTCCGGTG AGCTGAAGCG GCTGCGCGGG
GAGCACGAGG CAGCCGTGCA GGCCGAGGAA CAGGCTCGGG CCGTCGTGGA GGCGCTGGAG
GGGGATGTGC GCCGGGTGGC CGCGTTGGGC GATGCGGAGG AGCGTGCCGC CGAGGCGGTG
ACTGCCGCGG CCGCCCGCCG GGCTGAGGCC GAGGAGGCGT GGGCGTCCAC GGAGGCCGAG
CGGGCTGCGG CGGCCACCGC GCAGGAGGCG CTGGTGACGG CGCGCCGGGA CCACGAGCGC
GCCGTGGCGG ACCAGGTCGC ACGTCAGGCA CTGCTGGCCG AGGCGGCGGA GGCGGCCGAG
GCGGAAGCCG TCGCGGAGGA GGCTCGGGAG GCAGCGCTGG AGCCGCAGCA GGCCGCCGAG
GAGTCCGTGG CGCAGGTGGT GGCCCGGCGG GAGGAGGCCG AGCAGGCCGA GGCCGAAGCA
CGTGCGGCCT CCCGGACGGC GGAGGACCAG GTGGCGCTCG CGCGTGCTGC CGCGGAGCTG
ACCACGCTGC AGCGTGCGGT GGAGCGCCTC GACGCGCTGC GCGAGCGGCA GCGGGCGATC
CGTGCCCTGC TCGAGGGGGA CGTCGTCGAC GACGACGCGC TCGCCCGCAT CACGACCGCC
CAGGACGCCC TGCGGACCGC GACCGCCCGG CGCGACGCGG CCAGTCCCCG GCTGCGGGTG
GCCGGTGATG CCTCGGTGCC GGTGGTGCTC GACGGGCGGG AGCTGCCCGC TGACGAGCGG
CCCTGGGAGG CTCCGATGGG GGCGGCCACC CTGCTGGAGG TGGCGGGTGT GGAGGTGCAC
GTCCTGCCGC CGCGGGGCGC GGACGACTCC GAGGTCGAGG CAGCCCGCAG GGCGTTGTCC
GAGGCCCTGT CCGAGGTGGG GGCCCAGGAC GTGGCCCATG CCCACCGGTT GCACGCGGCG
GTGCAGCGGG CAGCGGCCGA CCGGGATGCG GTGGATGCCG AGCTGGAGAC GGCCCTGGAG
GGTCGCTCCG TGGAGGACTG GCGGGCCGAT GCCGCCGACG CTCGGGTGCG GGTCGAGCAG
GCCGACGGGG AGGCACCGTC CGTGACGGAT GCCCAGGCGG CCGCCCTCAC GGCGCGGGAG
GCCCTGGAGG CAGCGCGCGA GGCCGCCGAG GCGGTGCGCG TGGAGGAGGG GGCGGCTCGG
GAGACGGCCG CGACGCGGCG GGCTGCGCTC GACCGCGCGG AGGTGCAGCG CGACGCCGCG
GCCGCGGCCG TGGCCCGGGT GCAGGACCGC GTGGCGGCCG CGCGGGAGCT CGTCACGGAC
GACGCGGCGC GGGCCGCGGT GGAGAGCACC CGCCACGCAG TTGCTGATGC CGAGCACCAG
GTGGCCGACC GGCAGGAGGC GCTCGCCGCC GCGGGTTCGG TCTCCGAGGA GGACCTGCAG
TCGGTGCGGG TGGCGGCCGA GCGGGCCGAG GACCGGCACC GCCGGGCTCG TGACGAGCAC
CTGCGGGCCG AGGCGATGTT GGCCCAGGTG GGCCAGGAAG GTCGCGCAGA GGACCTCGAT
GCGGCTCGCA CCCACCTCGA GCAGGTCACC GAGGCCTTCA CCCGGGTGCA GGCGCGGGCG
GAGGCCCTGA AGCTGCTGCT CACCACGCTG CGGAACCGCC GGGCGGAGGC CCAGGCCAGT
TACGTGCAGC CCTTCCGGGA GGCGCTCGAG GAGCTGGGGT CCGTGCTCCA CCCGGAGGGC
TTCGCGGTGG AGGTGGCGCC GGACCTGTCG ATCGTCTCGC GGTCGGTGGG AGGTCGGCCG
GTTCCGTTGG AGGGCCTGTC GACCGGTGCG CGGGAGCAGC TCTCGGTGCT GTCGCGCCTG
GCCGTCGCGA AGGTGGTCGA CGCCGACGAG GGCATGCCGG TGGTGCTCGA CGACGCCCTG
GGCTGGTCCG ACCCGGACCG GTTGCGGCGC ATGGCCCGCG CCCTGGAGCG GGCGGGTGCG
GACGCCCAGG TGCTGGTCCT GACGTGCACG CCGGGCCGGT ACGACGCCAT CGCGGGCGCG
ACCGTCCGCA CCGTGGAGGA CCTGCGGGCG GCGGCTGTGG GCTGA
 
Protein sequence
MRIHALEVKD FRGIDHYRLE VPEAGVLVVE GPNEAGKSTL VRALDMLLTE KATAKKQYVK 
DTQPIGRDEG PTVTAELTVG GQRFTYAKQW VKGPRTEFRP HGPGQPLTGD DAHNHVVALL
DEHGDETLRK ALQLLQEGPL VVDGLGESRR LTAALDAVAG GDTGKDLDQA ASLVERVESD
AGVYWTAGGR ESGELKRLRG EHEAAVQAEE QARAVVEALE GDVRRVAALG DAEERAAEAV
TAAAARRAEA EEAWASTEAE RAAAATAQEA LVTARRDHER AVADQVARQA LLAEAAEAAE
AEAVAEEARE AALEPQQAAE ESVAQVVARR EEAEQAEAEA RAASRTAEDQ VALARAAAEL
TTLQRAVERL DALRERQRAI RALLEGDVVD DDALARITTA QDALRTATAR RDAASPRLRV
AGDASVPVVL DGRELPADER PWEAPMGAAT LLEVAGVEVH VLPPRGADDS EVEAARRALS
EALSEVGAQD VAHAHRLHAA VQRAAADRDA VDAELETALE GRSVEDWRAD AADARVRVEQ
ADGEAPSVTD AQAAALTARE ALEAAREAAE AVRVEEGAAR ETAATRRAAL DRAEVQRDAA
AAAVARVQDR VAAARELVTD DAARAAVEST RHAVADAEHQ VADRQEALAA AGSVSEEDLQ
SVRVAAERAE DRHRRARDEH LRAEAMLAQV GQEGRAEDLD AARTHLEQVT EAFTRVQARA
EALKLLLTTL RNRRAEAQAS YVQPFREALE ELGSVLHPEG FAVEVAPDLS IVSRSVGGRP
VPLEGLSTGA REQLSVLSRL AVAKVVDADE GMPVVLDDAL GWSDPDRLRR MARALERAGA
DAQVLVLTCT PGRYDAIAGA TVRTVEDLRA AAVG