Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_23550 |
Symbol | |
ID | 8373858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 2442283 |
End bp | 2443533 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644992587 |
Product | arabinose efflux permease family protein |
Protein accession | YP_003150093 |
Protein GI | 256826133 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.655191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCAA CGACTCGCTC TGAACAGACG CAGACCCGAC TGCCGTGGCT GCCCCTGCTC GCGCTCTCCA CCGCCGTGTT CATCACCGCG CTCACCGAAA CCCTGCCCGC TGGACTGCTG CCGGGGATGT CGGCGACCCT GGGCGTCAGT GCCGCCATGT CCGGCCAGGC CGTGACCGTC TACGCGGCGG GCACCGCCCT GACCGCCATC CCTCTCGCCC GGGCCACGGC TCCGTTCAAT CGCAAGACGG TACTGCTGTG GTCGATGGCC ATCTTCGCCG TCGCGAACAC GCTCACCGCC CTGATCCCGA TCTACACGAT CATGCTCGCC GGTCGCGTCA TCGCGGGCAT CGCAGCGGGC CTCGCCTGGG CCGTGCTCGC CGGCTACGCG CGCCGACTCG CCCCGGCTGG GCTGGAGGGG CGGGCGATCG CCATCGCCAT GACCGGCATC CCCGTCGCGC TCGCGCTCGG CGTGCCCGCG GGCACCTTCA TCGGCCAGCA CCTCGACTGG CGCGCCGCGT TTCTCGCGAT CACCGTCGCA GCCATCGGCG TGATCATCTG GATCGCGGGC GGCGTCCCCG CTGTCTCCAA CGGTGCTCAG GATGATGCGG CGCGAGCGGC GACCGCGCGA GCCACGCTCG CGATCCCCGG GGTTCTGCCC ATCATGGCGG TCGTGCTGCT GTATGTGCTG GGGCACACCA TCGTCTACTC CTACATCGCC CCGTACCTCG AAGCCGTGGG TCTCGGCTCG CAGGTCGACC TCATCCTGCT CGTGTTCGGT GCAGCCAGCC TCGTCAGCAT CTGGCTGACC GGGCGATACG TCGACACCCG CTTGCGCGCC CTGGCGCTGG CGGCCTCGAT CCTGTTCGTT ATCGCCGGTA CTGTCTTGGC GACGAACTCG GCACCGATCC TGATCTGGAT CGCGATCGCC ATCTGGGGTC TTGGATGGGG CGGAATCCCC TCACTCCTGC AGACCGCGGC GCCGCGAGCG GCCTTGGTGC ACAGCCCCGC TGCGGCCGAC ACCGCGCAAG CGATCCTCGT CACGCTCTGG AACGCGGCGA TGGCGCTGGG TGGACTCGTC GGCGGCATCA TCCTTGCCGG AATCGGCACG ACCGCGATCC CGATCGCAGC GACCTCGTTC GTCGTGCTCA GTCTCTTGAT CATCGCCGTC GCACGCAGAC ACGCCTTCCC GTCCCGCACG CCATACGTCG CTGATATGTC CGAGATGACG CACGAACAGA GCACCCACTG A
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Protein sequence | MTSTTRSEQT QTRLPWLPLL ALSTAVFITA LTETLPAGLL PGMSATLGVS AAMSGQAVTV YAAGTALTAI PLARATAPFN RKTVLLWSMA IFAVANTLTA LIPIYTIMLA GRVIAGIAAG LAWAVLAGYA RRLAPAGLEG RAIAIAMTGI PVALALGVPA GTFIGQHLDW RAAFLAITVA AIGVIIWIAG GVPAVSNGAQ DDAARAATAR ATLAIPGVLP IMAVVLLYVL GHTIVYSYIA PYLEAVGLGS QVDLILLVFG AASLVSIWLT GRYVDTRLRA LALAASILFV IAGTVLATNS APILIWIAIA IWGLGWGGIP SLLQTAAPRA ALVHSPAAAD TAQAILVTLW NAAMALGGLV GGIILAGIGT TAIPIAATSF VVLSLLIIAV ARRHAFPSRT PYVADMSEMT HEQSTH
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