Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_23220 |
Symbol | |
ID | 8373825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 2409091 |
End bp | 2410485 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644992556 |
Product | phytoene dehydrogenase-like oxidoreductase |
Protein accession | YP_003150062 |
Protein GI | 256826102 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC GGCCCGGCCT CACGCGGGTG CCGCTGCGCA CGGCGGACGC GGACGTCATC GTGGTGGGCG CCGGGGTGGC CGGCCTGGCG GCGGCCGCGC AGCTGACCGC GGCCGGGCGG CACGTGGAGG TGCTGGAGCA GGACGTGACG GTCGGGGGCC GGGTGGGGTC CTCGCTCGTC GACGGGTTCA CGGTGGACCA CGGTTTCCAC CTGGTCTACC CACGACCGGA GGGCCTGGCG GGGCTGGTGG GCCTGGAGGA CCTGGACCTG CACCCGCTGC TGCCGGGGCT GGACCTGCTG CTGGGTAGCG ACGCGCACGG GTCCGAGGTG CGGACCGTGG CCGACCCACG ACGTGCACCG GGACGGCTGG TCTCCACGCT GCGGGCGGGC CTGCGCGCGC ACGACCTGCA CAGCGCCCGC GAGGTGTGGT CCCTGCTGCG CTGGGCCCGG GCCGCCGAGG CCGCGGGCGA CGACCTGCCG TGGCCGCAGG CGCTGGCGGC CGGGGGCCTG CAGGGGCGCC CCGCGCTGGT GGCCGAGCGA CTTCTGACGG CCATGCTGCT GGAGGACCCC GGTGGGCGCA GTGGGGGCAG CGGCAGTGCG GACATCGGGA ACGGTGGGCG CAGTGGAAAC AGCGCAGCCA TCGGGGGCAG CGGGGGCAGC GCCGCATCGG ATGGGAGGAC GGCGCGGGAG AGGTTGCGCG CCTTCCTGCA CGCGGCACCG GCCCTGCCTG CACACGGCAT GGTCGCGCTC CCGGTGCACC TGGTAGGCCA CCTGGAGCGG CCGGTGCACA CCGGTTCCCG GGTCGATGCG GTGCGCCGCC GGGGCGGTTC GTGGGTGGTG GTGGGCGACC ACGGCACGTG GAGCGCTCCA CAGGTGGTGC TGGCCACGCC AGCCGGGGTC AGTGCGGACC TGCTCCACGG CTCGGGGGTG GACCTCCCAC TGCCGCACCA GCAGTGGCAC GGCGTGACCA CCTGGTGGTT CACCGCCGAC GAGGCGCCCA GTGGGTCGAC GGCCCTGCGG CTGGACGCGC GGCCCCATCG CGGCCCGGTG GCGGCGACGG CCGTGGTGAC CAACGTGTCC CCGGCCTACT CGGCGGACGG GCGGCCGCTC ATCGCGGCGC TGGTGCTGCA CCGCAACGGC CACCCGGAGG GGCAGGAGGC GGCCGTGCGG GTGCACCTGT CCGAGCTGTG GGGGACGCCG GCTTTCGGCT GGGAGGTGGT GGCCCGGCAG GACCAGGCCC ACGGGGTGCC GGTGCGTCCC GCGGCGAGCG CGGGGCTGCC CGGTGCCGAT GCTCCGCCCG GACTGTTCCT GGCCGGCGAC CACCTGGACC CCGGGATCAC CGGTGCCATG GAGTCCGGTG TCCGGGCCGC GGCCGACGCC CTGCGCGCCC GGTGA
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Protein sequence | MTVRPGLTRV PLRTADADVI VVGAGVAGLA AAAQLTAAGR HVEVLEQDVT VGGRVGSSLV DGFTVDHGFH LVYPRPEGLA GLVGLEDLDL HPLLPGLDLL LGSDAHGSEV RTVADPRRAP GRLVSTLRAG LRAHDLHSAR EVWSLLRWAR AAEAAGDDLP WPQALAAGGL QGRPALVAER LLTAMLLEDP GGRSGGSGSA DIGNGGRSGN SAAIGGSGGS AASDGRTARE RLRAFLHAAP ALPAHGMVAL PVHLVGHLER PVHTGSRVDA VRRRGGSWVV VGDHGTWSAP QVVLATPAGV SADLLHGSGV DLPLPHQQWH GVTTWWFTAD EAPSGSTALR LDARPHRGPV AATAVVTNVS PAYSADGRPL IAALVLHRNG HPEGQEAAVR VHLSELWGTP AFGWEVVARQ DQAHGVPVRP AASAGLPGAD APPGLFLAGD HLDPGITGAM ESGVRAAADA LRAR
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