Gene Ksed_20580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20580 
Symbol 
ID8373562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2136805 
End bp2137611 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content71% 
IMG OID644992307 
ProductLSU ribosomal protein L17P 
Protein accessionYP_003149817 
Protein GI256825857 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0203] Ribosomal protein L17 
TIGRFAM ID[TIGR00059] ribosomal protein L17 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.69658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCC CGAAGAAGGG CCCGCGCCTG GGCAGTGGCC CGGCGCACGA GCGGCTGCTG 
CTGGCCAACC TGGCCACCTC GCTGTTCGAG CACGACCGCA TCACGACCAC GGAGGCCAAG
GCCAAGCGCC TGCGCCCCCT GGCCGAGCGG ATGATCACCT TCGCCAAGAA GGGTGACCTG
CACAACCGTC GCAAGGTCAT GACCGTGATC CGCGACAAGT CCGTCGTGCA CAAGCTGTTC
ACCGAGATCG CCCCCGACGT GGCCGACCGC GAGGGTGGCT ACACCCGCGT CGTGAAGATC
GCGCCGCGCA ACGGTGACAA CGCGCCGATG GCCGTCATCG AGCTCGTCCG CGAGCCGGTG
GCCCGCAAGG CCGTCGTGAC CGAGGCCGAG CGCGCGAACC AGAACGCCGC CCGCGCCGCG
GCTGCCCCCG CCGCGGAGGA GACCGCTGAG GTCGACGCCG CATCGGCCGC CGTGCCGGTG
GAGGACACCG CTGCCGAGAC CCCGGCCGAC GCGACCACGG ACACCGTGGA CGCTGCCGAC
GCCGCTGTGG CTGCTGACGC CGCGGTCGCC GAGGGCGACG CGATCGAGGC CGGCAAGACC
AAGTCCGGCA AGGACCTGCC GACCGGGGCC GCCAACGCCC TGGCCGACGG TGCCGCTCCC
TCCGAGGAGT ACACGGTCAA GGGCAACATG GACTCCGGCA AGTACCACCA GCCCGGTGGC
CGCTGGTTCG AGTCGACCGT TGCCGAGGTC TGGTTCAAGA GCGAGGCCGA CGCCGAGGCC
GCTGGCTTCA CGAAGGCCGG CAGCTGA
 
Protein sequence
MPTPKKGPRL GSGPAHERLL LANLATSLFE HDRITTTEAK AKRLRPLAER MITFAKKGDL 
HNRRKVMTVI RDKSVVHKLF TEIAPDVADR EGGYTRVVKI APRNGDNAPM AVIELVREPV
ARKAVVTEAE RANQNAARAA AAPAAEETAE VDAASAAVPV EDTAAETPAD ATTDTVDAAD
AAVAADAAVA EGDAIEAGKT KSGKDLPTGA ANALADGAAP SEEYTVKGNM DSGKYHQPGG
RWFESTVAEV WFKSEADAEA AGFTKAGS