Gene Ksed_20530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_20530 
Symbol 
ID8373557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2131126 
End bp2131575 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content69% 
IMG OID644992302 
ProductLSU ribosomal protein L13P 
Protein accessionYP_003149812 
Protein GI256825852 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.780175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.443705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCC ACACCCCGAA GCAGGCGGAG ATCCTGGACG GCCGCGTCTG GCACGTCATC 
GACGCCACCG ACGTGGTGCT CGGCCGCCTC GCGAGCCACA CCGCAGCGCT GCTGCGCGGC
AAGCACAAGG CGAACTTCGC GCCCCACGTC GACACCGGCG ACTACGTCAT CATCATCAAC
GCCGAGAAGG TGGCCCTGAC CGGCGCCAAG CTCGCCCAGA AGCGTGCCTA CCGCCACTCC
GGCTTCCCGG GCGGCCTGCG CTCGGAGAAC TACGCCGAGA TGCTGGAGAA GCACCCCACC
CGTGCGGTGG AGAAGGCCGT CCGCGGCATG CTCCCCAAGA ACCGTCTGGG CCGTCAGCAG
ATCACCAAGC TGAAGGTCTA CGCCGGCGCC GAGCACCCGC ACGCCGCGCA GCAGCCCCAG
CCCTTCGAGA TCACCCAGGT TGCGCAGTAA
 
Protein sequence
MRTHTPKQAE ILDGRVWHVI DATDVVLGRL ASHTAALLRG KHKANFAPHV DTGDYVIIIN 
AEKVALTGAK LAQKRAYRHS GFPGGLRSEN YAEMLEKHPT RAVEKAVRGM LPKNRLGRQQ
ITKLKVYAGA EHPHAAQQPQ PFEITQVAQ