| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_20080 |
|---|
| Symbol | |
|---|
| ID | 8373512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 2086387 |
|---|
| End bp | 2087739 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644992259 |
|---|
| Product | predicted membrane protein |
|---|
| Protein accession | YP_003149769 |
|---|
| Protein GI | 256825809 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2311] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0149559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCCG CCATCCGCGC CACCGAGTTC GTCTCGGACG CCGCCACCTC CTTCGACTCC
CTGGACGGGC CCAACACCGG TCTGAGCACC GAGGTCGTCC CCGACACCCC GCACGCGTGC
GAGCCGGCGG GGCGGGCGAC CCCGGAGGAC CAGGGGCCGA CGGAGCACCG CCTGACCGGT
CTCGACGCGG CCCGAGGGCT GGCGCTGCTG GGCATGATAT CGGTCCACAT CTTTCCCGCC
TTCACCCCCG AGATCACGGT CCACCCCGCG TGGACGGTGG CCTCGGGCAC GGCCTCGGCG
CTCTTCGCCG TCCTCGCCGG AGTGTCGCTG GCGCTCATGA GCGGGGGATC GCGGCCGCTC
TCCCGGGGCC GCTGGACGCC GATGCTGCGG CAGGGGGTGC GGGCGATCCT CATCCTGGCC
ATCGGCCTGA TCATGGGGCT GATCATCCCG GTTGACGCGG CCGGCGTGAT CCTGCCCTAC
CTGGCGGCCC TGTTCGCCCT GGCGATCCCT TTCCTCGGGC TGCGCGCCAG GCCGCTCTTC
GTCCTCGCCG CGGTCGGGGC CGTGCTGGGC CCGGTGCTGA GCTACTGGCT CCGGCAGGGC
GACCCGGTGC CGGACCTGGG CAACCTGGTC CCCGGGGACC TGTTCACGCG GCCGCTCGAG
TTCCTGGAGA CCCTGGTGGT CACCGGACTC TTCCCCGCCC TGAGCTGGCT GCCCTACATC
CTGCTGGGGA TGGGCATCGG CCGCCTGCGG CTGCGGCGGC GCATCTCGGC GGTGCACCTG
GCGCTGGCCG GCGTGGCCGT CACGGCCCTC TCCTGGGTGG TCTACCAGGT GCTCACCGGG
CCGCTGGGGG CGCTGGAGCA CGTGGCCGAG GGGCAGATGG CAGCCGGGTG GACCCTGGAC
GAGACGGCTG ACCTCCTCGT CTGGGGGCCG GACGGCACCG TCCCCACCAC CTCCTGGTGG
TGGCTCAGCA CGATCGCCCC GCACAGCGGG ACGCCGGTGG ACCTGCTCCG CACCAGCGGT
GTCGCCCTCC TGGTGATCGG CGTCATGCTC GGGCTGGGGA CCCTGCTCTC GCGGTCGCTG
CTGCTGCTCA CGGCGCCCGG ACGCATGACC CTCACGCTCT ACTGCCTGCA CCTGCTGATG
CTGCTGCTCC CCCTGGAGAC CTTCGGGGTG GGGGTGGAGT TCGCCCTGCA GGTGCTGGTC
GTCGTCGTCT TCGCGCTGGC CTGGCTGAGC GTGCAGCGGC AGGGACCGTT GGAGTGGCTG
GTGGGTCATG CCACCCGGGC GCTCGTCCCC GCCTCCTTCG TCGCGCGGCG ACGGGTCAGA
CGTTGGGGGA GACGTCCTTG GCCGAGGGGG TGA
|
|---|
| Protein sequence | MSPAIRATEF VSDAATSFDS LDGPNTGLST EVVPDTPHAC EPAGRATPED QGPTEHRLTG
LDAARGLALL GMISVHIFPA FTPEITVHPA WTVASGTASA LFAVLAGVSL ALMSGGSRPL
SRGRWTPMLR QGVRAILILA IGLIMGLIIP VDAAGVILPY LAALFALAIP FLGLRARPLF
VLAAVGAVLG PVLSYWLRQG DPVPDLGNLV PGDLFTRPLE FLETLVVTGL FPALSWLPYI
LLGMGIGRLR LRRRISAVHL ALAGVAVTAL SWVVYQVLTG PLGALEHVAE GQMAAGWTLD
ETADLLVWGP DGTVPTTSWW WLSTIAPHSG TPVDLLRTSG VALLVIGVML GLGTLLSRSL
LLLTAPGRMT LTLYCLHLLM LLLPLETFGV GVEFALQVLV VVVFALAWLS VQRQGPLEWL
VGHATRALVP ASFVARRRVR RWGRRPWPRG
|
|---|
| |