Gene Ksed_19590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_19590 
Symbol 
ID8373464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2042258 
End bp2042956 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content73% 
IMG OID644992214 
Productuncharacterized membrane protein 
Protein accessionYP_003149724 
Protein GI256825764 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.927854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.04221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGC CCCGTGTGCA CCCGAACGGT GACGTCCACC GGACGGGCGA CCGGCTGAAC 
TGGCTGCGCG CCGCCGTGCT CGGCGCGAAC GACGGCATCG TGTCCACGGC CGGCCTCGTG
GTCGGCGTGG CCGGTGCCAC GGCGGACTCG CGGGTCCTGT TCATCACCGG GCTGGCCGGT
CTGGTGGCAG GGTCGCTGAG CATGGCGGCC GGCGAGTACG TCTCGGTCTC CAGCCAGCGT
GATGCTGAGC GCCAGCTGGT CCGCGACGAG CGGCGCCACC TGGCGGAGAT GCCCGACTTC
GAGCGGCGCG AGCTGGTCGA GATGCTGCAG GAGCGCGGGA TCTCAGAGCC GCTGGCGCAC
CAGGTGGCCG ACCAGCTCGA TGAGGAGGCC GCCCTCCAGG TGCACAGCGA GCTGGAGTTC
GGCGTCACCC CCGGCGAGGA GGTGAACCCG TGGAGCGCGG CGATCGCCTC GATGATCGCG
TTCGCGCTCG GGGCCGTGCT GCCGCTGCTG GCGATCGTCC TCTCCCCCGA GGCCTCCCGG
GTGGCCATCA CGGCGGTCTC GGTGCTGGTG GCCCTGGCCG TGACCGGGTA CTCCAGCGCG
AGGCTCTCGG ACGCGCCGCC GGGAGTCGCC GTGGTGCGCA ACTGCCTGGG TGGCGCCCTG
GCGATGGCGT TGACCTACGC TGTCGGCTCG GCCCTCTGA
 
Protein sequence
MATPRVHPNG DVHRTGDRLN WLRAAVLGAN DGIVSTAGLV VGVAGATADS RVLFITGLAG 
LVAGSLSMAA GEYVSVSSQR DAERQLVRDE RRHLAEMPDF ERRELVEMLQ ERGISEPLAH
QVADQLDEEA ALQVHSELEF GVTPGEEVNP WSAAIASMIA FALGAVLPLL AIVLSPEASR
VAITAVSVLV ALAVTGYSSA RLSDAPPGVA VVRNCLGGAL AMALTYAVGS AL