Gene Ksed_17860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17860 
Symbol 
ID8373291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1860415 
End bp1861149 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID644992046 
Productdimethyladenosine transferase (rRNA methylation) 
Protein accessionYP_003149558 
Protein GI256825598 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.622772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCCA CCGATGGCCC GATCATTGAG ATCGGCCCCG GTGACGGAGC ACTCACCTCG 
CCGCTGGCCC AGCTCGGGCG ACCGGTGACA GCCGTCGAGA TCGACACCCG GCTCGCCCAA
CGCCTGGCCG AGCGGCTGGG GCCACATGTC GAGGTCGTCG CCGACGACTT CCTGGCCTAC
CGGCTTCCAA CGTCCGCGCA TGTGCTCGTC GGGAACCTGC CGTTTCACCA GACCACGGCC
ATGCTGCGAC AGATTCTGCA CTCCCCGGCA TGGACCGATG CAATCGTGCT CGTGCAATGG
GAAGTCGCGC GGCGCAGAGC GGGCGTCGGC GGTGCCACGA TGATGACGGC CCAATGGGCG
CCTTGGTTCG ATTTCACCCT GCACAGTCGT GTTCCCGCTC GCGCGTTCAC CCCGCGTCCG
GGAGTCGACG GCGGAATCCT TGCCATTCAC CGTCGCGAAC ATCCGCTGCT GTCCCCGGCA
CGGCGACGCC AGTTCCATGC CCTAGTCCAC CGCGTCTACA CCGGTCCCGG CCGCGGGCTC
GCCCAGATTC TCGCACGCAC CACCGCACTC GGCTCACCAC AGGCGTGGCT GACACGCCAC
GGCATGAACA CTGCGGACCT GCCGAAGGAC ATGCCCGTCG AGGTATGGGT GGACTTGTTC
AAGACCACGG GTTCATCGCC GCCTGTACAC CGTGCTCGGA CGCAGCAGCC GAAGTCGAGG
AGGCGCCGTC GATGA
 
Protein sequence
MAATDGPIIE IGPGDGALTS PLAQLGRPVT AVEIDTRLAQ RLAERLGPHV EVVADDFLAY 
RLPTSAHVLV GNLPFHQTTA MLRQILHSPA WTDAIVLVQW EVARRRAGVG GATMMTAQWA
PWFDFTLHSR VPARAFTPRP GVDGGILAIH RREHPLLSPA RRRQFHALVH RVYTGPGRGL
AQILARTTAL GSPQAWLTRH GMNTADLPKD MPVEVWVDLF KTTGSSPPVH RARTQQPKSR
RRRR