Gene Ksed_15540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15540 
Symbol 
ID8373060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1590288 
End bp1591667 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content75% 
IMG OID644991822 
Producthypothetical protein 
Protein accessionYP_003149334 
Protein GI256825374 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00170521 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCT TGCCCCACCT GGTGCAGGGG TACGCCGCGG CCCTCCCGGA GCTCTCGCAG 
CCCTGGGAGG CCGCGTCGGT GCCCGAGCCC CGGCTGCTCG CCCTCGACGA GGCCGTGGCC
GCCGACCTCG GTCTCGATGC GGGGTGGCTG GCCTCCGCGG CCGGCCTGGC CTTCCTGACC
GGGGACCTCT CGGCGCTGCC CGACGCGCCG CCGACCGTCG CCCAGGCCTA CGCGGGGCAC
CAGTTCGGCG GATTCTCCCC GTTGCTGGGC GACGGGCGGG CGCTGCTGCT GGGCGAGCTC
ACCGACGCCG CGGGCCGCAC CGTGGACCTG CACCTCAAGG GATCGGGCCG CACCCCTTTC
GCCCGCGGCG GCGACGGCAA GGCGGCCGTG GGCCCGATGC TGCGGGAGCA CCTCATGAGC
GTCTTCGTGC ACGCCGTGGG CATCCCGACC ACCCGGTCCC TGGCCGTGGT GGCCACGGGG
GAGCAGGTGC TGCGGGAGGT CGCCCTGCCC GGGGCCGTGC TGGCCCGGGT GGCCTCCAGC
CACCTGCGCG TGGGCACCGT CCAGCACGCC GCGGCATCCC ACGGCCCGGA GGTGACCGCG
CGCCTGGTGC GGTACGCCCT GGAGCGGCAC CACCCGGAGC TGCTGGGAAC CCCCGAGCCC
CCCGCCCTGG CGCTGCTGCG TTCCGTGGCG GACGCCCAGG CCCGCCTGGT CGCGCAGTGG
ATGGGCGTCG GCCTGGTGCA CGGGGTGATG AACACCGACA ACATGACCCT CTTGGGCGAG
ACCATCGACT ACGGGCCCGT CGCCATGCTG GAGGCCCACG ACCCGCAGGC GGTTTTCAGC
TCGATCGACA CCCAGGGCCG CTACGCCTAC GGCAATCAGC CGGCGATCGC GCAGTGGAAC
CTCGCGCGGC TCGCCGAGGC GCTGCTGCCC CTCATCGACG ACGACGCCGA CGCGGCGGTG
GAGCGGGCCA CCGAGGTGGT CACCGGCTTT GCCCAGACCT ACCGGGCGGA GCACACCGCC
GTGTTCTCCG CCAAGCTCGG CCTGGCCGAA CCCGATGCGG GGCGGGTGGC CGAGTACCTC
GAGCACCTGA CCGCCGAGGG ACTGGACCAC ACCGCGTCCT TCCGCGCCCT GGCCGACGAG
GCCGAGGCGG CGGGCGATCC CGAGAGGGCA GCGCGCCTGC GGGCCGTGAA CCCGGTCTAC
GTCCCGCGGA ACCACGTGGT CGAGGAGGTG CTCGCCGCAG CGACCGCGGG CGACCTCGCG
CCCTTCGAGC GGCTGGTCGG TGCGCTGCGC GAGCCCTTCA CCGAGCGCCC GGGCCTGGAC
GACCTCGCAC GCACGGCTCC GGAGGGCTGC CCGCCCCACG TGACCTTCTG CGGGACCTGA
 
Protein sequence
MTPLPHLVQG YAAALPELSQ PWEAASVPEP RLLALDEAVA ADLGLDAGWL ASAAGLAFLT 
GDLSALPDAP PTVAQAYAGH QFGGFSPLLG DGRALLLGEL TDAAGRTVDL HLKGSGRTPF
ARGGDGKAAV GPMLREHLMS VFVHAVGIPT TRSLAVVATG EQVLREVALP GAVLARVASS
HLRVGTVQHA AASHGPEVTA RLVRYALERH HPELLGTPEP PALALLRSVA DAQARLVAQW
MGVGLVHGVM NTDNMTLLGE TIDYGPVAML EAHDPQAVFS SIDTQGRYAY GNQPAIAQWN
LARLAEALLP LIDDDADAAV ERATEVVTGF AQTYRAEHTA VFSAKLGLAE PDAGRVAEYL
EHLTAEGLDH TASFRALADE AEAAGDPERA ARLRAVNPVY VPRNHVVEEV LAAATAGDLA
PFERLVGALR EPFTERPGLD DLARTAPEGC PPHVTFCGT