Gene Ksed_13930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13930 
Symbol 
ID8372901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1439445 
End bp1440386 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content73% 
IMG OID644991667 
ProductRecB family exonuclease 
Protein accessionYP_003149185 
Protein GI256825225 
COG category[L] Replication, recombination and repair 
COG ID[COG2887] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.199879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.841258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCG CAGCCCTGTC CCCCAGCCGT GCCGGCGACT TCATGCAGTG CCCGCTGCTC 
TACCGCTTCC GGGTGGTCGA CCGGCTGCCC GAGCCGCCGA GCGCGGCCGC GGTCCGGGGC
ACGTTCGTGC ACTCGGTGCT GGAGAACGTG TTCGACCTAC CCGCCCACCG GCGTCGCCCG
GACGATGCCG TGGGCCTGAT GGAGCAGACC TGGGCCGACC TGGTGGCCGA GCGCCCGGAG
GTGCTGGAGG TGCTGCGCGC GGACGGTTCG GGGGCAACGG CGTTGGACGC CGTGGACGGT
GACGCGGATC GGGCCAGCAC GGGCGCTGCC GTCCAGCCCA CCCCCGAGGA GCTGGCGGCG
TGGATGGCGG ACGCCGAGGC ACTGGTGCGC AGGTGGTTCA CCCTGGAGGA CCCCAGCGTG
CTGGAGCCGG CCGAACGGGA GCTGTACGTG GAGGTGCCGG TGGACCGTGG TGGCGAGCGG
GGCGAGCTGG TGCTGCGAGG GTACGTCGAC CGGCTCGACG TGGCGCCGGC CGACGGCGCG
TTGCGGGTGG TGGACTACAA GACCGGCCGC GCCCCCTCGG AGCTCTTCCA GGCCAAGGCG
CTGTTCCAGA TGAAGTTCTA CGCCCTGGCC ATCTGGCGGC TGCGGGGTCG GGTGCCTGCG
CTGCTGCAGC TGGTCTACCT GAAGGACGGC ACCGTCCTGC GCCACGTGCC CACGCAGGAG
GAACTGCTGG CCACCGAGCG CAAGGTCGTG GCGCTCTACG ACGCCATCGA GCGCGCGGCG
GAGCTCGGCG ACTGGCGGCC GAACCGCAGC CGGCTGTGCG ACTGGTGCAG CTTCCAGTCC
ATCTGCCCGG CGTGGGGTGG CACGCCCCCG CCGCTGCCCG GGAACGCCAG GGACCGGGCG
ACCGATGAGG CGGTGACCGG CGATGCCGAC ACGGCCGACT GA
 
Protein sequence
MVTAALSPSR AGDFMQCPLL YRFRVVDRLP EPPSAAAVRG TFVHSVLENV FDLPAHRRRP 
DDAVGLMEQT WADLVAERPE VLEVLRADGS GATALDAVDG DADRASTGAA VQPTPEELAA
WMADAEALVR RWFTLEDPSV LEPAERELYV EVPVDRGGER GELVLRGYVD RLDVAPADGA
LRVVDYKTGR APSELFQAKA LFQMKFYALA IWRLRGRVPA LLQLVYLKDG TVLRHVPTQE
ELLATERKVV ALYDAIERAA ELGDWRPNRS RLCDWCSFQS ICPAWGGTPP PLPGNARDRA
TDEAVTGDAD TAD