Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_13690 |
Symbol | |
ID | 8372877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1420013 |
End bp | 1423234 |
Gene Length | 3222 bp |
Protein Length | 1073 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644991644 |
Product | helicase, type I site-specific restriction-modification system restriction subunit |
Protein accession | YP_003149162 |
Protein GI | 256825202 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.161894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACG TCCACAAGGA ACTGGCCATG GAGGACGAAG CAGTCGCCCA GTTGGCTACG CAGGGGTGGG TCTACGAGGA GGGCTCTGCG GCTCGCTACG ACAAGCAGCG TGCCCTCTTT CCCGAGGACG TCTTCGCGTG GCTGGAGGCC ACCCAGCCGG ACGAACTGGC CAAGCACCTG AAGCCGGGCT TGGACCCTGC CGCTCAGGCG AAGGCTCGCA ACGGCATCCT GGACGCCCTC GCTGACACGC TGAGCAACGT CGGTGGCGGT GGGGGCACGC TGACTGTCAT GCGAAAGGGA TTTCGACGCA TCTCTTCGCG CTTCCAGATG GTGCAGGCCA AGCCCACTGA GTCCATGAAC CCGAAGACGG TCAAGGACTA CGAGTCGAAC ATCCTGCGCG TCGTCCGGCA GGTGCACTAC TCGACCACCA ACGCGAAGAA GTCCATCGAC CTGGTGCTGT TCTGCAATGG CATCCCGGTG ACGACCATCG AATTGAAGAC CGAGTTCACC CAGTCCGTGA CGCGCGGTCA GGTGCAGTAC AAGAACGACC GCGACCCGGG CACGGACGGC AAGGACGTCC TGCTGGCGTG GGGCAAGCGC GCGCTCGTGC ACTTCGTCGT GACCGACAAC GAGGTCTCGA TGACCACGAA GTTGGCCGGG AGCAAGACCA CCTTCCTGCC CTTCAACCAG GGCAACGGAT CAGGCAAGGG CAACCCGCTC AACCCGGACG GTGCACGTAC CGAGTACTTC TGGCGGGACG TGCTCGACCC GGATGCCTTC CTGACGATCC TGACCAAGTA CCTCGTGGTC CGCACGGATG AGAAGCCGGA CCCGGTGACG GGTAAGGCGG AGAAGTCCAC GTCGCTGCGG TTCCCGCGCT TCCACCAGTG GGATGCGGTG GAGAGGGTCA TCTCGCGGGT GGCGGAGCAG GGGGTGGGTG AGCGGTACCT CATCGAGCAC TCGGCTGGCT CGGGCAAGAC GGACACCATC GTCTGGACGG CGTTCCGGCT CGCGGCGCTG CACGACCAGT CGAACAAGAA GGTCTTCGAC TCGGTGATCG TGGTGACCGA CCGCAACGTG CTGGACAAGC AGATGAGCGC AGCCATGCGT CAGTTGGACC CGCACGGCGC GCAGATGGTC CGCATCGACG GGTCCGGGGC GTCGAAGTCC AGTGAACTGG GCGAGGCGCT GCGGCTGAAG ACGCCAATCA TCGTGGTGAC GATCCAGACT GCGCCCTTCG CGTTGAAGTA CCTGCGTGAG CAGGCCGACG CATCGGGCGG GCACTTCGCG GTCATCGCGG ACGAGGCCCA CTCGTCCCAG ACCGGGACGG CTGCGGCCAA GTTGAAGGCC GTCCTGAGTC CGCAGGAGCA GTCGGACGTT GAGGACGGCG GGGAGGTCGA TGCGCAGACG CTGCTGGCGG CTGAACTACC GCAGCGGGCC GAGACGCCGA ACCTGACCTA TCTCGCCTTC ACGGCGACCC CGAAGTCCAA GACCCTCGAA CTGTTCGGCA CACCGGACCC GCAGGACACC GGCGAGGACG GCAACCCGAG GCCCAAGCCG TTCCACCGCT ACACGATGCG TCAGGCCATC GAGGAGGGCT TCATCCTCGA CGTGCTCCAG AACTACACCG AGTACGACGT CGCCTATGAG TTGGGCTTGA AGGTCAAGGA CGAGGCCGTC GAGTCCGTCG ACAAGGAGGC CGCTCGCAAG GCCGCTCAGC GCTGGGTGAT GCTGCACGAG CACAACATCT CCCAGAAGGT CGACATCATC ATTCGGCACT TCCGCGAGAA CATCGCCGGG ATGCTGGGTG GCACCGCCAA GGCGATGATC GTGACCTCCT CGCGCAAGCA CGCCCTGCGG TACTACAACG CCATCGAGCG GTACGTGGCC AAGCACGGCT ACGACGACGT GCATGCCTTG GTCGCCTTCT CCGGCAAGGT CACCGTCGCC GACGACGACA CCGACGTCAG GCCCGACGAC CTGCTCGGCG TGGGTGAGTA CACCGAGGCG AGCGTCAACA CCGGCACGAA GAACAAGGCG CTGGACGACG CCTTCAATGG CCCCGCCTAC CAAGTGATGA TCGTGGCCAA CAAGTTCCAG GTCGGCTTCG ACCAGCCGCT GTTGTGCGCG ATGTACGTCG ACAAGCGACT CGACGGCGTG ATGGCCGTCC AGACCCTCTC GCGCCTCAAC CGCACCTGGG CGGGCAAGGA CCACGTGTAC GTCCTCGACT TCGTGAACAA GGGCGAGGAC ATCCTCGCGG CATTCCAGCC GTACTACGAG GGGGCCGAGT TGGGGGCCGT CACCGACCCC GACCTGCCGA ACCGCCTCGC GGTGAAACTG GACGACGTGG GCAGGGACCG CATCTACACG ATGGCCGAGA TCGAGGCTGC CGCTGTCGCC GCGACCGATC CCAACGGAAC GCACAAGGCG CTGACTGCCG CCATCGACCC GGCAACGGAG CGCTTCGGTG ATCTGCTGAG GCAGGCCCGG GAGGACAAGG ACGACGAGGA GCGAACGCGG CTGGAGGGCT TCCGTTCGGA CCTGTCCAAC TACGTGAACG CCTACGACTT CCTTTCGCAG ATCGTCCCCT ACGACCTGGA GATGGAGAGC CGCTCGATCT ACTACCGCAT GCTCGCCAAG CGTCTGCGGG ATGAGAACTC CGGCATCGTC GTGGAGATCG GCCCGGTCGC CCTGGCCAAG TACAAGGTCG AGAGCAAGGG CGCTCGGACG CTCGACCTGA CGTCCGGGCA GGCCACTCCG TTGAGCCCGC TGGCTGAGAT GGGCACCGCC GAGGCGCGTG AGCGGGAGCA GGCCCATTGG GCGGACATCA TCGACGCCAT CAACTCCCTC TTCGCGGACA GCGGCCTGAG CCCCGACGAC GCGGTGCCCG AGATCGAAGG CATCCTCAGG GACGCGAAAA GAGACCCGGA CCTCGTGGCG AAGGCCAAGG CCAACAGCGA CGCCGACTTC AACGCTGACA ACACGGTCGT GGCCTCGGTG CTGAGCAAGT TCATCGACCG CCGCGAGAAG AGCGAGGAGA TCGTCAACGC TCTGCTGAAG GGGCAGAATA TGGACACGTT CGCCCAACTG CTCGCCATGC TCGGCTTCCG GGAGTACCTC GCCACCGTCG ACTACCACTT CCCGAATGAG AACGTCGCTG TCGAGGTCGA GGCTCAACAC TCTCCATCGA CTGCCAAGGC CAATGAGGGG GCCAGGGCAT GA
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Protein sequence | MTDVHKELAM EDEAVAQLAT QGWVYEEGSA ARYDKQRALF PEDVFAWLEA TQPDELAKHL KPGLDPAAQA KARNGILDAL ADTLSNVGGG GGTLTVMRKG FRRISSRFQM VQAKPTESMN PKTVKDYESN ILRVVRQVHY STTNAKKSID LVLFCNGIPV TTIELKTEFT QSVTRGQVQY KNDRDPGTDG KDVLLAWGKR ALVHFVVTDN EVSMTTKLAG SKTTFLPFNQ GNGSGKGNPL NPDGARTEYF WRDVLDPDAF LTILTKYLVV RTDEKPDPVT GKAEKSTSLR FPRFHQWDAV ERVISRVAEQ GVGERYLIEH SAGSGKTDTI VWTAFRLAAL HDQSNKKVFD SVIVVTDRNV LDKQMSAAMR QLDPHGAQMV RIDGSGASKS SELGEALRLK TPIIVVTIQT APFALKYLRE QADASGGHFA VIADEAHSSQ TGTAAAKLKA VLSPQEQSDV EDGGEVDAQT LLAAELPQRA ETPNLTYLAF TATPKSKTLE LFGTPDPQDT GEDGNPRPKP FHRYTMRQAI EEGFILDVLQ NYTEYDVAYE LGLKVKDEAV ESVDKEAARK AAQRWVMLHE HNISQKVDII IRHFRENIAG MLGGTAKAMI VTSSRKHALR YYNAIERYVA KHGYDDVHAL VAFSGKVTVA DDDTDVRPDD LLGVGEYTEA SVNTGTKNKA LDDAFNGPAY QVMIVANKFQ VGFDQPLLCA MYVDKRLDGV MAVQTLSRLN RTWAGKDHVY VLDFVNKGED ILAAFQPYYE GAELGAVTDP DLPNRLAVKL DDVGRDRIYT MAEIEAAAVA ATDPNGTHKA LTAAIDPATE RFGDLLRQAR EDKDDEERTR LEGFRSDLSN YVNAYDFLSQ IVPYDLEMES RSIYYRMLAK RLRDENSGIV VEIGPVALAK YKVESKGART LDLTSGQATP LSPLAEMGTA EAREREQAHW ADIIDAINSL FADSGLSPDD AVPEIEGILR DAKRDPDLVA KAKANSDADF NADNTVVASV LSKFIDRREK SEEIVNALLK GQNMDTFAQL LAMLGFREYL ATVDYHFPNE NVAVEVEAQH SPSTAKANEG ARA
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