Gene Ksed_13320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13320 
Symbol 
ID8372840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1382502 
End bp1383227 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content75% 
IMG OID644991607 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003149126 
Protein GI256825166 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACCC CCTCCTCCCC CGCGGTCCGC TTCGACGACG TGCGCCTGCT GCGCGGCGAC 
GTCCGGGCAC TGGACGGGCT GACCTTCCAC GCGCCCGCCG GCGCGGTCAC CTGCGTGCTC
GGGCGCAACG GCGCGGGCAA GTCCACGATG GTGGAGGCGT CGATGGGGCT GCTGCCGGCC
GCCTCCGGGA GCGTCCGGGT GCTCGGTGCC GAGCCGTGGC GGTCGACCGC CGCCCACCGG
GCACGGGTCT CGGTGGCCCT GCAGGACGGA GGACTGCCCA CCGGCGTGCG CCCCTCGGTC
CTGCTGGCCC ACCTCTCGCG GCTCTACCCG AACCCGCGGC CGTGGCGGGA CCTGTGGAAG
CGCCTCGGGA TCCAGGCCTA CGACCGCCGC ATCATCCGCC GCCTCTCCGG CGGCCAGAGG
CAGCGCGTCG CGCTGGCCGC CGCACTGGTG GCCCGTCCCG AGGTCACGTT CCTGGACGAG
CCGACGGCCG GCCTCGACCC CCACAGCCGC TTGGACGTCT GGGAAGTCGT GCGCCGCATC
GCGCAGGAGG GCACGGCCGT GGTGGTGACC ACCCACAACT TCGAGGAGGC CGAGCGCCTG
GCCGACCACG TCGTCGTCAT CGACGACGGC CGCTGCCTGG CCCAGGGAAC CCCCGCCGAG
GTCGCCGCGG GAACCACTCT GGAGGAGCGC TTCTTCTCCC TCACCGGCCG GGAGGGGGTC
CGGTGA
 
Protein sequence
MSTPSSPAVR FDDVRLLRGD VRALDGLTFH APAGAVTCVL GRNGAGKSTM VEASMGLLPA 
ASGSVRVLGA EPWRSTAAHR ARVSVALQDG GLPTGVRPSV LLAHLSRLYP NPRPWRDLWK
RLGIQAYDRR IIRRLSGGQR QRVALAAALV ARPEVTFLDE PTAGLDPHSR LDVWEVVRRI
AQEGTAVVVT THNFEEAERL ADHVVVIDDG RCLAQGTPAE VAAGTTLEER FFSLTGREGV
R