Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_12810 |
Symbol | |
ID | 8372789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 1322669 |
End bp | 1323859 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644991558 |
Product | predicted membrane protein |
Protein accession | YP_003149078 |
Protein GI | 256825118 |
COG category | [S] Function unknown |
COG ID | [COG4129] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.157231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00366432 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCTCGC ACCGCCCGAC CCAGCGCACC ACCACCGGCA GCATCCGGGT GCAGAACGAC TCCGCGCGGG AGCTGCGCGC CTTCGAGCGG GCCCGTCGCT GGTCGGCCTC GGAGGCCCGG CGGCGCCGCG ACCGGCTCCA GCAGCGCATC TTCCCGATGC TCCAGGCCTC GATCGGCGCG GGCGTCAGCT GGTACGTCGC CCGTGAGCTG TTCGGGCACG AGGCACCGAT CTTCGCCGGG GTCGTCGCGG TCGTCTGCCT GGGCATGAAC TTCGGCAACC GCCTGACCCG CGCCGTGGAG ATCACCGTCG GCGCCGCCAC GGGCATCCTC ACCGGCGAGC TGATCGTCCA CTTCCTGGGG ACGGGCGCCT GGCAGACCGC CCTCATCGCC CTGTTGGCAA TGGTGATCGC CACCTTCGCC GGGGCAGGCA GCCTGCTCAC GATCCAGGCG GGGGTCCAGG GGGTGGTGGT CGCGACCGCC ACGGTCCTGC CCGGAGGCGC ACTCTCCCGG TGGATCGATG CGGTGATCGG CGGGCTGGTG GCGATCGCGA TCGCGATGAT CACGCCCACC TCCCCCCTGC GCAAGCCCCG CCGCATGGCG CGCCGGCTCA CCGAGGAGGT CGCCCGGCTG CTGGACCGGA CCGCCCACGG CCTCTCGGAC CGCAACGAAC ACATCGTCGC CGAGGCCCTG CGCGACGCCC GCTTCACCGA CCACCTCATC GGGGAGCTGC GCAGCCAGGT GGAGGAGGGC GCCGCCATCG CCCGCACCGT GCCGTGGCAG TGGCGCAAGC GCACCCACCT GCGGGGACTG GACCGGCAGC TGACCGCCTT CGACCGTCTG CTCCGCAACG CCCGCGTCCT GGTGCGCCGG GCGGACGTGG CCATCCTGGA GGGCGAACCG GTTCCCTCGA GCTACGTGGA GCTCGTGGCG GAGGCCGCGG ACATCGCCTC CGACCTGGCC AAGGCGCTGG GCGACCAGCA GGCCCTCGGT GCGGTGCGGC GGCAGCTGGG CGAACTGGCG GAGGAGACCA ACCACCGGGC CCCGCAGCCG TCGCTCAGCG CCGAGGTGAT CCGTGCCCAG GTGCGCTCGG CGATCGTGGA CATGTACATG CTCACCGGCC TCTCCTACGG CGAGGCTCGC GTCCGCGTGC CGTCGCAGTA CCACGAGCGG CGGTCCGCCG AGGACGACTG A
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Protein sequence | MSSHRPTQRT TTGSIRVQND SARELRAFER ARRWSASEAR RRRDRLQQRI FPMLQASIGA GVSWYVAREL FGHEAPIFAG VVAVVCLGMN FGNRLTRAVE ITVGAATGIL TGELIVHFLG TGAWQTALIA LLAMVIATFA GAGSLLTIQA GVQGVVVATA TVLPGGALSR WIDAVIGGLV AIAIAMITPT SPLRKPRRMA RRLTEEVARL LDRTAHGLSD RNEHIVAEAL RDARFTDHLI GELRSQVEEG AAIARTVPWQ WRKRTHLRGL DRQLTAFDRL LRNARVLVRR ADVAILEGEP VPSSYVELVA EAADIASDLA KALGDQQALG AVRRQLGELA EETNHRAPQP SLSAEVIRAQ VRSAIVDMYM LTGLSYGEAR VRVPSQYHER RSAEDD
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