Gene Ksed_12450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12450 
Symbol 
ID8372753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1278767 
End bp1280266 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content74% 
IMG OID644991522 
ProductRecombination protein MgsA 
Protein accessionYP_003149042 
Protein GI256825082 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.101973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0965428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG ACCTGTTCTC CGCCGCGGCC GACGCCGCCG GGACGCCCGC TGCAGGCGAC 
GGCGATGTCG GGTGGGTTCC CGACGAGCCG TTGGCTGCCC GGATGCGGCC GCGCTCCCTG
GAGGAGGTGG TGGGGCAGCG CGAGGTGCTC GCCCCCGGGA GCCCGCTGCG CCGCCTCATC
GAGGGGCGGC GCGGGGTGGC CGGCGCGTCC TCGGCGATCC TCTGGGGTCC GCCCGGCACG
GGCAAGACCA CCCTCGCCCG CCTGGTGGCC GATGGGGCCG ACCGCACCTT CGTGCAGCTC
TCGGCCGTCA CCGCCGGGGT GAAGGACGTG CGTGCGGTGA TGGAGGCCGC CCGGCGCGAT
AAGTCGATGT ACGGCCGGCA GACGGTCCTC TTCCTGGACG AGATCCACCG CTTCACCAAG
GCCCAGCAGG ACGCGCTGTT GCCCGGGGTG GAGGACCGCA CCGTGATCCT GGTGGCCGCC
ACCACCGAGA ACCCCAGCTT CACCGTCGTC ACGCCCTTGT TGAGCCGCTC GGTGCTGGTG
CGCCTGGCCG GGCTGGACCG GCAGGACGTG CGGGACCTGC TGGACCGGGC GGTCGTCGAC
GAGCGGGGGC TCGACGGACG CTTCCGCCTC GAGGACGAGG CCGCCGACGG CATCGTGCAG
CTCGCGGGCG GCGACGGGCG CCGGGCCCTG ACGACCCTGG AGGCCGCGGC CGGCGCCGCG
GAGTCCGAGG TGGCACCGGG TGCCGAGGGA ACCGGGCCGG TGGTGGTGAC GACCGCGCAC
GTGGAGCAGG CCCTCGACCA GGCCGTCGTG GGCTACGACC GCGACGGCGA CCAGCACTAC
GACGTCACCA GTGCCTTCAT CAAGTCGATG CGGGGTTCGG ACGTGGACGC CGCGCTGCAC
TACCTTGCGC GGCAGATCGA GGCCGGGGAG GACCCCCGGT TCATCGCGCG GCGGGTGGTG
ATCGCCGCCA GCGAGGACGT GGGCATGGCC GACCCCTCGG CCCTGCAGAC CGCGGTGGCC
GCGATGCACG CCGTCGCGCA GATCGGCATG CCGGAGGCCC GCATCGTGCT GGCCCAGGCA
GTGGTGCACG TGGCGCTGGC CCCGCCGTCG AACGCGGTGT ACGCCGGCAT CGACGCCGCC
CTGGCCGACG TCCGCGCGGG GCGCGGGGGG TGCCGTGCCG GCCCACCTGC GCGACGGCCA
CTACGCGGGT GCCTCGCAGC TCGGTCACGG GGTGGGGTAC GTCTACGCCC ACACCGAGCC
GGACGGGGTG GCCGCGCAGG AGTACCTGCC GGACGACCTG GCCGGCGCCC GGTACTACGA
GCCGGTGGAG CGGGGCTTCG AGGCGACCTT GGCACAGCGG TGGGCGAGAG TGCGTGGCCT
GCTGAGGAAG TAGGCGCAGC CGCCGCGCAG CGGCCATGGT CAACGTGGCG TCACGGCTGT
GTAACGAATT GGTTGCATCG GCTCCGATGG TGTGGCGCGG GCCACCCTCG GTACCCATGA
 
Protein sequence
MSDDLFSAAA DAAGTPAAGD GDVGWVPDEP LAARMRPRSL EEVVGQREVL APGSPLRRLI 
EGRRGVAGAS SAILWGPPGT GKTTLARLVA DGADRTFVQL SAVTAGVKDV RAVMEAARRD
KSMYGRQTVL FLDEIHRFTK AQQDALLPGV EDRTVILVAA TTENPSFTVV TPLLSRSVLV
RLAGLDRQDV RDLLDRAVVD ERGLDGRFRL EDEAADGIVQ LAGGDGRRAL TTLEAAAGAA
ESEVAPGAEG TGPVVVTTAH VEQALDQAVV GYDRDGDQHY DVTSAFIKSM RGSDVDAALH
YLARQIEAGE DPRFIARRVV IAASEDVGMA DPSALQTAVA AMHAVAQIGM PEARIVLAQA
VVHVALAPPS NAVYAGIDAA LADVRAGRGG CRAGPPARRP LRGCLAARSR GGVRLRPHRA
GRGGRAGVPA GRPGRRPVLR AGGAGLRGDL GTAVGESAWP AEEVGAAAAQ RPWSTWRHGC
VTNWLHRLRW CGAGHPRYP