| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_11870 |
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| Symbol | |
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| ID | 8372695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 1213166 |
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| End bp | 1214425 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644991465 |
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| Product | putative TIM-barrel protein, nifR3 family |
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| Protein accession | YP_003148991 |
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| Protein GI | 256825031 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.0673914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA CTCCCGCCAC CACGCACCCC CCGCTGAGCT CCCCGGCCCA CCCGACCGCA
CCGACGGCCG CCGGCCACCC CGTGCTGCCG CCGCTGCAGA TCGGGCGCCT CACCATCGAC
TCCCCGGTGG TCCTGGCTCC GATGGCGGGC ATCACCAACC GGGCCTTCCG CCGCCTGTGC
CGGGAGTACG GGTCCGAGGG CCTCACGGCG GGCGGCGCCA GCGGGGCGAG CAGCCTGTAC
GTCTCGGAGA TGATCACCAC CCGCGCGCTG GTGGAGCGCA CCCCCATCAC CATGAAGCTG
GTGGAGTTCG ATGCCGAGGA GCAGCCGCGT TCCATGCAGC TCTACGGCGT GGACCCGGCC
ACGGTGCGGG CGGCGGCGCG GGACATCGTC GAGAACGACC GCGCCGACCA CATCGACATG
AACTTCGGCT GCCCCGTCCC CAAGGTCACC CGCAAGGGCG GGGGCGCGGC CATCCCGTGG
AAGTCCACGC TGTTCCGCGA CATCGTCCGC TCGGCGGTCG AGGAGGCCAG CAAGGCCGAC
ATCCCGGTCA CCGTGAAGAT GCGCATCGGC ATCGACGAGG ACCACCACAC GCACCTGGAG
GCCGGCCGCA TCGCGGAGGA CATGGGGGCC GCAGCGGTGG CGCTCCACGC GCGGACGGCC
TCCCAGGCCT ACTCCGGGCA GGCCCGCTGG GGAGAGATCG CGCGCCTCAA GCAGACGGTC
ACCACCATCC CGGTGCTGGG CAACGGCGAC ATCTGGTCGG CCGAGGACGC GCTGCGGATG
GTCGCCGAGA CCGGGTGCGA CGGGGTGGTC GTGGGCCGTG GCTGCCTGGG GCGGCCGTGG
CTCTTCACCG ACCTGGCAGC GGCCTTCGCG GGGTCCGACG CCCGGGTGAC CCCCACCCTG
CGCGAGGTCA CGGCCACGCT GCGCCGCCAC GCCGAGTACC TGGCGGACTT CCACGAGGAC
GAGAACCACG CCTGCCGGGA CATCCGCAAG CACATCACCT GGTACCTCAA GGGCTTCCGC
GTGGGCGGGG AGCTGCGCTC ACAGCTCGGC CTGGTGAACT CCCTGGCGGA CCTGGACGCC
CTCATCGAGA CCCTCGACCT GGACCAGGAG TGGCCCGCCG AGGCGGCGGA CGGACCGCGC
GGCCGCAAGG GGTCCGAGCG GCAGGTCGCG CTCCCCGAGA ACTGGTTGGC CAGCCGTGAG
GTGGACGAGA CCTGGGCCCG CCGGTTGGCA GCGGCCGAGC TCTCGGTCGA CGGCGGCTGA
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| Protein sequence | MTTTPATTHP PLSSPAHPTA PTAAGHPVLP PLQIGRLTID SPVVLAPMAG ITNRAFRRLC
REYGSEGLTA GGASGASSLY VSEMITTRAL VERTPITMKL VEFDAEEQPR SMQLYGVDPA
TVRAAARDIV ENDRADHIDM NFGCPVPKVT RKGGGAAIPW KSTLFRDIVR SAVEEASKAD
IPVTVKMRIG IDEDHHTHLE AGRIAEDMGA AAVALHARTA SQAYSGQARW GEIARLKQTV
TTIPVLGNGD IWSAEDALRM VAETGCDGVV VGRGCLGRPW LFTDLAAAFA GSDARVTPTL
REVTATLRRH AEYLADFHED ENHACRDIRK HITWYLKGFR VGGELRSQLG LVNSLADLDA
LIETLDLDQE WPAEAADGPR GRKGSERQVA LPENWLASRE VDETWARRLA AAELSVDGG
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