Gene Ksed_11390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11390 
Symbol 
ID8372647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1164331 
End bp1165872 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content76% 
IMG OID644991417 
Productpentulose/hexulose kinase 
Protein accessionYP_003148944 
Protein GI256824984 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID[TIGR01314] gluconate kinase, FGGY type 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.0344488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGC ACCAGGCACC CCCCCACCAG GTCGTCATCG GCATCGACGT CGGGACCACG 
GCCGCCAAGG TCACGGCCTT CGGGGTCGGC ACCCCCTTCA GGACCACGGT GGAGCGGGAG
TACCCGCTGC TGCGGCCCCG CCCCGGGTGG GCTGTCCAGG AGGTCCCCAC GGTGCTGGCG
GCGGTCGCGG CGGCGCTGGC GGAGTGCGTG CACCGCGTGG CCGGTAGCCA CGTGGCCTGC
CTCTCGGTGA GCACGGCCAT GCACGGCCTG GTGGGCCTCG ACGACGAGCT GCGCCCGCTG
ACCCCGCTGG CGACCTGGGC CGACGGCCGG GCCGCGGAGC AGTCGGCGCG GCTGGCCACC
CAGGGAGTGG CCCGCGAGCT GCACGAGCGT TCGGGTACGC CGGTGCACCC CTTCGCGCCG
TTGTCGAAGC TGTTGTGGTT CGCACAGGAG GAGCCCGAGC TCTTCGGCCG GGTGCGCGCC
TGGGCCGGGC TCAAGGACGT GGTGCTGCAC CACCTCACCG GCACCCTCGT CACCGAGCTC
TCCAGCGCGA GCGGCACGGG TCTGCTGGAC CTGCGCACTC GGCAGTGGTC GCCGGACACG
CTCGAGCTGG TCCGCGTGCG CCAGGACCAG CTGCCGGAGG TGCTGGACAC CACCGCTGCC
CTGGGGCTGA CCCGCCGGGT GGCCGAGCGC CTGGGGCTGC CGGTCGCGAC CCCGGTGGTG
GTGGGGGCCG GCGACGGCCC CCTGGGAAAC CTCGGGACCG GCGCGCTGGA GCCGGGCGTG
GCCGGTCTCT CCACCGGCAC CAGCGCCGCA CTGCGGCAGA TCGTTCCCGA GCCCCGCATC
GATCCCGAGG GACGGCTGTT CTGCTACGCG CTCACGCGGG ACGCCTGGGC GGTCGGGGGC
GCGCTGACCA CCGGCGGCTC GGTGGTGCGC TGGGCCGGTG ACGTCTTCGG GCGGGACCTC
ATGGGGAGCC CCGGGGAGAC GGTGGACGCC GACCTGCTGG CGCTGGCGCG GTCGGTCCCG
CCGGGCTCCG AGGGACTGGC GATGGTGCCG TGGCTCGGGG CGGAGCGGGC CCCCCTGTGG
GACCCCACCG TCCGGGGCGC CTTCGTGGGG CTGCGCGCGA GCCACACCCG CGGCCACTTC
GTCCGGGCGG CCGTGGAGGG CGTGGCCCTG CAGGTCGAGG CCGTGCTGCG GCAGGTGGAG
TCCATCCACC CCGTCCACGA GATCCGCGCC ACCGGAGGGG TGTTCCGCAG CGACCTGTGG
CGCGACGTGC TCTCGGCGGT GCTGAACCGA CCCCTCGTCG TGGCGGCCGG GGCGGAGGGC
TCGGGTCTGG GCGCCGCCGC GCTGGGGGCG TGGGCGACCG GACTGGCCGA CGACCTGCCC
GGGGCGCTGC AGCTGCTGGC GGACGAGGAC ACCCTCACCG GCGACGAGGA GGTCATCCGG
CCGGACCCTG AGCGCGTGGC GCAGTACGAC CGGCTCACGG ACTCCGTCGC GGACACCCTC
GAAACCCTGG GACGGGCGGC GGAGGTGCTG CGCAGCAGCT GA
 
Protein sequence
MAQHQAPPHQ VVIGIDVGTT AAKVTAFGVG TPFRTTVERE YPLLRPRPGW AVQEVPTVLA 
AVAAALAECV HRVAGSHVAC LSVSTAMHGL VGLDDELRPL TPLATWADGR AAEQSARLAT
QGVARELHER SGTPVHPFAP LSKLLWFAQE EPELFGRVRA WAGLKDVVLH HLTGTLVTEL
SSASGTGLLD LRTRQWSPDT LELVRVRQDQ LPEVLDTTAA LGLTRRVAER LGLPVATPVV
VGAGDGPLGN LGTGALEPGV AGLSTGTSAA LRQIVPEPRI DPEGRLFCYA LTRDAWAVGG
ALTTGGSVVR WAGDVFGRDL MGSPGETVDA DLLALARSVP PGSEGLAMVP WLGAERAPLW
DPTVRGAFVG LRASHTRGHF VRAAVEGVAL QVEAVLRQVE SIHPVHEIRA TGGVFRSDLW
RDVLSAVLNR PLVVAAGAEG SGLGAAALGA WATGLADDLP GALQLLADED TLTGDEEVIR
PDPERVAQYD RLTDSVADTL ETLGRAAEVL RSS