Gene Ksed_11110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_11110 
Symbol 
ID8372619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1135926 
End bp1136732 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content69% 
IMG OID644991389 
Productsignal peptidase I 
Protein accessionYP_003148916 
Protein GI256824956 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.056722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.175156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCCCG TGACCCAGGA GAACCAGCCG ATGTCGCCTG ATCCCCACGT GGACGGCCCC 
GCAGCCCCCC GGACGGAGGG GACCGGTGAC GGTGCCACCT CCCTGGCGGC GCAGGACACC
CCCGACGGCA CGTCCGCGAA GAACCCGGAG GACGCGAAGA AGGAGAAGCG GGGCGGGTGG
TGGAGCGCCC TCAAGGAGAC CGTCGTCGTG GCGGTGCTGG CGCTCTTCTT CGCCTTCCTC
ATCAAGACCT TCCTCGTGCA GGCCTTCTTC ATCCCCTCGG GGTCCATGGA GAACACTCTC
GAGGAGGGCG ACCGGCTCCT GGTGAGCAAG CTCTCGCCGA CGCCCTTCGA CATCGAGCGC
GGCGAGATCA TCGTCTTCCA GGACCCCGGG CAGTGGCTCG GACAGTCCAC CCAGGAGAAG
AGCGCCCTGT ACCGGGCGGG CCAGTTCGTG GGGGTGCTGC CCGGCGACGG CGACGAGTAC
CTCATCAAGC GCGTCATCGG CATGCCCGGT GACCACGTGG AGTGCTGCGA CGCGCAGGGG
CGGGTCTTGG TGAACGGTAC GGCCGTCGAC GAGCCCTACG TCTACCCGGG CAACCCGCCG
AGCCTGGTCG AGTTCGACGA GGACGTCCCC GAGGACCACG TCTGGGTGAT GGGCGACCAC
CGCTCCAACT CCGGTGACTC GCGCTTCAAC GGCACCGTGC CGATGGACCG GGTGACCGGC
AGCGCGTTCC TCGTGATCTG GCCGCTGGGC AGCATCGGGA CCCTGTCCGG CTCGGACGCC
TTCGACGCGG TTCCCGCCCC GCAGTGA
 
Protein sequence
MGPVTQENQP MSPDPHVDGP AAPRTEGTGD GATSLAAQDT PDGTSAKNPE DAKKEKRGGW 
WSALKETVVV AVLALFFAFL IKTFLVQAFF IPSGSMENTL EEGDRLLVSK LSPTPFDIER
GEIIVFQDPG QWLGQSTQEK SALYRAGQFV GVLPGDGDEY LIKRVIGMPG DHVECCDAQG
RVLVNGTAVD EPYVYPGNPP SLVEFDEDVP EDHVWVMGDH RSNSGDSRFN GTVPMDRVTG
SAFLVIWPLG SIGTLSGSDA FDAVPAPQ