| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_10310 |
|---|
| Symbol | |
|---|
| ID | 8372540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1055231 |
|---|
| End bp | 1056022 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644991312 |
|---|
| Product | 3-hydroxybutyrate dehydrogenase |
|---|
| Protein accession | YP_003148841 |
|---|
| Protein GI | 256824881 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 0.998138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCT CCCCCGCCTC CAGCCCGTCG CCGCACCTGC TAGCCGGCAA GCGCGCCCTG
GTCACCGGCG GCGCCGGTGG GTTGGGCTCG GGCATCGCCA CCGCCCTGGC CGGCGCCGGG
GCGCACGTGG TGCTCGCCGA CATCAACGGC GAGAAGCTCG CCGAGGTGGT CGCCCGCATC
GAGGCCGATG GCGGCACCGC CGAGGCGTGG GAGCTGGACC TCTCCGACAG CGGTGCCCTG
GCCGAGCTGT CCTTGGAGGT CGACGTGCTG GTGAACAACG CAGGCATCCA GCACGTCCAG
CCGCTCCACG AGTTCGATGT GGCCAGGTGG GAGCTCATCC AGAAGCTCAT GCTCACCGCG
CCCTTCCTGC TCACCCGCGC GGCACTGCCC CACATGTACG ACGCCGGGTG GGGCCGCATC
ATCAACATCT CCAGCGCCCA CGGCCTCCGG GCGAGTGAGT ACAAGAGCGC CTACGTCTCG
GCCAAGCACG GCCTGGAGGG CCTGAGCAAG GTGACCGCCC TGGAGGGCGC GCCGCACGGC
GTGACGAGCA ACTGCATCAA CCCCGGCTAC GTGTGGACCC CGCTGGTGGA GCAGCAGATC
AAGGACCAAG CCGCCAGCCA CGACATGACC GAGGACGAGG TGGCCGAGAA GGTGCTGCTC
AAGAAGCAGG CCCTCAAGGA GTTCGCCTCC GTGGAGGCCA TCGCCAACGC CGCCCTGTTC
CTCTGCGGCC CCCACTCCTC CTCGATGACC GGCGCGAACC TCGTCATCGA CGGCGGCTGG
TCCGCCCAGT GA
|
|---|
| Protein sequence | MDTSPASSPS PHLLAGKRAL VTGGAGGLGS GIATALAGAG AHVVLADING EKLAEVVARI
EADGGTAEAW ELDLSDSGAL AELSLEVDVL VNNAGIQHVQ PLHEFDVARW ELIQKLMLTA
PFLLTRAALP HMYDAGWGRI INISSAHGLR ASEYKSAYVS AKHGLEGLSK VTALEGAPHG
VTSNCINPGY VWTPLVEQQI KDQAASHDMT EDEVAEKVLL KKQALKEFAS VEAIANAALF
LCGPHSSSMT GANLVIDGGW SAQ
|
|---|
| |