Gene Ksed_06540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06540 
Symbol 
ID8372163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp646506 
End bp647342 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content68% 
IMG OID644990941 
ProductDNA-binding domain-containing protein, AraC-type 
Protein accessionYP_003148481 
Protein GI256824521 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.977824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTACG ACTGCGTGAA GGTGATCGTC GTCAGGTCGG GCTCGGCGAT TCTGTTCAGC 
GAGTTCGGGC AGAGGCCCGT CAACGTCGGC GACGCGGTGA TTCTCGGGGC AAACGTGCTG
TGCGGCTCGG AGCCCGAGGG GCATATCACC GTCACCACCA TCTACCTGGA CACCGACTAC
GTGATCGACC AGGTGTTCTG GCAGCACGCC GGGTTGTTGC AGGACCGGCT CGAAGCCCAT
TGGCTCGCCG AGACCGTCTA CTCGGAGCCC GCACAGATAC TCCGCCTCGG CGAGGAGCGC
GCCGGGATGC TGATGCCGTG GCTGGATGAG CTGGTCGACC GCAGCATCGA CGGTGACTTC
GCCCGGAGCT TCTATCGGAT GCAGGCGGTG TGGTTCAGCA TCGCCCACGT GATCGCCCCG
TTCGTGAAGG TCTCCCCGGT GCGGATATCG GCGTCGCAGC GTGCCCACAT CCGGCCCACG
CTGCCACGGC ATCGCCAGTT CGCGCCGTTG CGTGCCGAGG CTCGCCGGGC CGCTGAGCTG
CTGCACCGGG CGCCGGAAGA ACACTGGACC CTCGACGCGC TGGCCGCGCG GGTGCATCTG
TCGCCCTCGC AGCTCAGCCG GGTGTTCACC GACGCCTACG GCAAGACCCC GCTGGCGTAT
CTGACCATGC TGCGGGCCGA GCACCTTGCC AAGTCGTTGC GGGAGACCGA TCTGCCGATT
GAGACCGCGA TGCGGGAGGT CGGCTGGCGC AGCCGCGGGC ATGCCGCCCA GCAGTTCCGC
AAGTACGTCG GTCTCACCCC CACCCGGTAC CGGCAGTTGA CCCTTCGCGC GAGCTGA
 
Protein sequence
MAYDCVKVIV VRSGSAILFS EFGQRPVNVG DAVILGANVL CGSEPEGHIT VTTIYLDTDY 
VIDQVFWQHA GLLQDRLEAH WLAETVYSEP AQILRLGEER AGMLMPWLDE LVDRSIDGDF
ARSFYRMQAV WFSIAHVIAP FVKVSPVRIS ASQRAHIRPT LPRHRQFAPL RAEARRAAEL
LHRAPEEHWT LDALAARVHL SPSQLSRVFT DAYGKTPLAY LTMLRAEHLA KSLRETDLPI
ETAMREVGWR SRGHAAQQFR KYVGLTPTRY RQLTLRAS