Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_05560 |
Symbol | |
ID | 8372065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 556735 |
End bp | 557646 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644990845 |
Product | dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein |
Protein accession | YP_003148388 |
Protein GI | 256824428 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGC AGACGAACAA CGCCTCGGAC TCCCCCGCCG TCGACCCCGT GACCCGCTTC GAGAGCATCA CCCCGCCCGA GCAGGACCAA GACTTCCCGG GCCTCGACAC CGAGCTGGAC CCGGTGCCCG ACCTCGGGGA GGACAGCTAC CGCGGGAGCG GGCGCCTGGA GGGCAGGAAG GCCCTCGTGA CCGGTGGCGA CTCCGGCATC GGCGCCGCCG TGGCCATCGC CTACGCCCGG GAGGGCGCCG ACGTGGCGAT CAACCACCTG CCGGCCGAGC AGTCGGACGC CGACCGCATC ATCGCCCTCA TCGAGGCCGA GGGGCGCACG GCCGTCTCGA TTCCCTCGGA CCTGACCACC CGCGAGGCCT GCGACGACGT GATCGCGCAG GCAGTGGAGG GGCTCGGCGG GCTGGACATC TTGGTGAGCA ACGCCGGCAA GCAGGTCTCC ACCCCGGAGA TCAGCCAGAT CAGCGACGAG CAGTTCGACC TCACCATGAA GACGAACGTG TACGCGATGT TTTGGCTCTG CCGCGCGGCC GTGGAGCACC TCGGTACGGG GAGCTCCATC ATCATCACCA CCTCGGTGCA GGCCTACTCC CCCAGCGAGC ACCTGCTGGA CTACGCGGCC ACGAAGGCTG CCGAGAACGC GTTCGGCAAG GCGCTGTCCA AGCAGCTGGC CCCGAAGGGG ATCCGGGTGA ACCTGGTGGC CCCGGGGCCG ATCTGGACGG TGCTGCAGGC CGTCGAGGGC CAGCCCGAGG AGAAGTTGCC GAAGTTCGGC AAGGACCAGC CGCTGGGCCG CGCCGGGCAG CCGGCCGAGC TGGCCTCGGC GTATGTGTTC CTGGCCAGCC CCGAGGCCAG CTACGTCGTG GGCGAGACGC TCAACGTGAA CGGCGGCGCC GACTCGCCGT GA
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Protein sequence | MNEQTNNASD SPAVDPVTRF ESITPPEQDQ DFPGLDTELD PVPDLGEDSY RGSGRLEGRK ALVTGGDSGI GAAVAIAYAR EGADVAINHL PAEQSDADRI IALIEAEGRT AVSIPSDLTT REACDDVIAQ AVEGLGGLDI LVSNAGKQVS TPEISQISDE QFDLTMKTNV YAMFWLCRAA VEHLGTGSSI IITTSVQAYS PSEHLLDYAA TKAAENAFGK ALSKQLAPKG IRVNLVAPGP IWTVLQAVEG QPEEKLPKFG KDQPLGRAGQ PAELASAYVF LASPEASYVV GETLNVNGGA DSP
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