Gene Ksed_05560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05560 
Symbol 
ID8372065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp556735 
End bp557646 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID644990845 
Productdehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein 
Protein accessionYP_003148388 
Protein GI256824428 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGC AGACGAACAA CGCCTCGGAC TCCCCCGCCG TCGACCCCGT GACCCGCTTC 
GAGAGCATCA CCCCGCCCGA GCAGGACCAA GACTTCCCGG GCCTCGACAC CGAGCTGGAC
CCGGTGCCCG ACCTCGGGGA GGACAGCTAC CGCGGGAGCG GGCGCCTGGA GGGCAGGAAG
GCCCTCGTGA CCGGTGGCGA CTCCGGCATC GGCGCCGCCG TGGCCATCGC CTACGCCCGG
GAGGGCGCCG ACGTGGCGAT CAACCACCTG CCGGCCGAGC AGTCGGACGC CGACCGCATC
ATCGCCCTCA TCGAGGCCGA GGGGCGCACG GCCGTCTCGA TTCCCTCGGA CCTGACCACC
CGCGAGGCCT GCGACGACGT GATCGCGCAG GCAGTGGAGG GGCTCGGCGG GCTGGACATC
TTGGTGAGCA ACGCCGGCAA GCAGGTCTCC ACCCCGGAGA TCAGCCAGAT CAGCGACGAG
CAGTTCGACC TCACCATGAA GACGAACGTG TACGCGATGT TTTGGCTCTG CCGCGCGGCC
GTGGAGCACC TCGGTACGGG GAGCTCCATC ATCATCACCA CCTCGGTGCA GGCCTACTCC
CCCAGCGAGC ACCTGCTGGA CTACGCGGCC ACGAAGGCTG CCGAGAACGC GTTCGGCAAG
GCGCTGTCCA AGCAGCTGGC CCCGAAGGGG ATCCGGGTGA ACCTGGTGGC CCCGGGGCCG
ATCTGGACGG TGCTGCAGGC CGTCGAGGGC CAGCCCGAGG AGAAGTTGCC GAAGTTCGGC
AAGGACCAGC CGCTGGGCCG CGCCGGGCAG CCGGCCGAGC TGGCCTCGGC GTATGTGTTC
CTGGCCAGCC CCGAGGCCAG CTACGTCGTG GGCGAGACGC TCAACGTGAA CGGCGGCGCC
GACTCGCCGT GA
 
Protein sequence
MNEQTNNASD SPAVDPVTRF ESITPPEQDQ DFPGLDTELD PVPDLGEDSY RGSGRLEGRK 
ALVTGGDSGI GAAVAIAYAR EGADVAINHL PAEQSDADRI IALIEAEGRT AVSIPSDLTT
REACDDVIAQ AVEGLGGLDI LVSNAGKQVS TPEISQISDE QFDLTMKTNV YAMFWLCRAA
VEHLGTGSSI IITTSVQAYS PSEHLLDYAA TKAAENAFGK ALSKQLAPKG IRVNLVAPGP
IWTVLQAVEG QPEEKLPKFG KDQPLGRAGQ PAELASAYVF LASPEASYVV GETLNVNGGA
DSP