Gene Ksed_03510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03510 
Symbol 
ID8371861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp336558 
End bp337166 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content73% 
IMG OID644990647 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_003148192 
Protein GI256824232 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.584729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCG ACGACGACCC GTGGCTGGTC GCCGGCCTGG GGAACCCCGG CCCGCGCTAC 
GCCGGGAACC GGCACAACGT GGGCGCGATG GTGGTCGCGG AGATGGCTGC CGGCGCGGGC
GTGAAGCTGT CGGCCGCCCG CCAGGCCCGC GCGGTGAGCG CTGAGACCCG GCTGGGCACC
CTGCCCGGTG GGCGCCCCGG CCGGCGGGTC GTGCTGGCCA CCCCCCTGGA CTTCATGAAC
CTCAGCGGCG GCCCGGTCAG CGGGCTGATG AAGTACCACG GCATCGACGT CGACCACCTG
GTGGTGCTCC ACGACGAGCT CGACATCGAC TTCGGCGCGG TGCGGCTCAA GAAGGGCGGC
GGCGAGGGCG GCCACAACGG ACTGCGCTCC ATCACCCAGT CCCTGGGCAC GAAGGACTAC
CACCGCATCC GGTTGGGCAT CGGCCGGCCG CCGGGGCGCA TGGACGTGGC CGACTTCGTG
CTGCGGGACT TCTCCCCCAC CGAGCGCGCG GAGCTGCCCT TCCTGCTCGG CGACGGGGCC
GATGCGGTGG AGCGCCTGCT GCACCACGGC CTGGAGGCTG CGCAGCAGTT CCACCACTCA
CCGCGCTGA
 
Protein sequence
MEIDDDPWLV AGLGNPGPRY AGNRHNVGAM VVAEMAAGAG VKLSAARQAR AVSAETRLGT 
LPGGRPGRRV VLATPLDFMN LSGGPVSGLM KYHGIDVDHL VVLHDELDID FGAVRLKKGG
GEGGHNGLRS ITQSLGTKDY HRIRLGIGRP PGRMDVADFV LRDFSPTERA ELPFLLGDGA
DAVERLLHHG LEAAQQFHHS PR