Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_00330 |
Symbol | |
ID | 8371546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 36138 |
End bp | 37127 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644990349 |
Product | short-chain dehydrogenase of unknown substrate specificity |
Protein accession | YP_003147895 |
Protein GI | 256823935 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 66 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.6279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCA CCCCGGCCGC TCCCCCCCGT CAACCGCTCG CCCTGGTCAT GGGCGCCTCC CGCGGACTCG GCCTGCTCTG CGCCGCCGAG CTGCTGCAAC ACGGCCACCG CGTAGTCCTC AGCTCCCGCG ACGAGGCCTC CTTGGCTGCC GCGCGCACCC AGTTGCTGGC CGAATACCCG GGCGCGCGGG TGGACGTCGC CCCCTGTGAC ATCTCCGACC GCCGGGCCGT GCAGGCGCTG GTGCAGCGCG TGGAGACCGA GCTCGCCCCC ATCGAGGTCC TGCTGACCGT CGCCGGCATC ATCCAGGTGG GCCCCGTGCA GGCGATGACC CTGGAGCACT TCGACCAGGC CGTCTCCACC ATGCTGATGG GCCCGGTGAA CCTGACCCTG CAGGTACTGC CCCACATGCG CGAGCGCGGC CGCGGCCGCA TCGGCACCGT GACCAGCGTC GGCGGCAAGG TGGCCCCGCC GCACCTGCTG CCCTACTCCA CGGCCAAGTT CGGTGCGGTC GGCTTCAGCG AGGGGCTCAC CGCCGAGCTG GCCGGCACCG GCATCACGGC CACCACCATC GTCCCGGGCC TGATGCGCAC CGGTTCGCAC GACGCCGCGC AGTTCACCGG CGACGTGGCC CGCGAGTTCG CGTGGTTCGG CCCCTCGGCC TCCCTGCCCC TGCTGGCCAT GGATGCCGAG CGTGCCGCCG AGCGGATGGT CCACGGCGTG CTCGAGGGGC ACACCCACGT GATGCTGTCC CCGGTGACCC AGGTCGGCTC CCGGGTGCAC GGCCTGGCGC CCTCGTTCAC CACGCGGCTG ATGGGGCTGG CCAACCGGGT GCTCCCAACC GCCCCGGCCG TGGACCCGCT GGGCCCCGGC ACCACCGTGG AGGGCCGGGT GGCCCGCCAG GGCCTGACGG GTCGCGCCCG CCGGGTGGTG GACGCGCTCT CCACCCTCGG CGACCGCGCC GGGGAGCAGA TAAACGAACG CGGCGCCTGA
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Protein sequence | MDITPAAPPR QPLALVMGAS RGLGLLCAAE LLQHGHRVVL SSRDEASLAA ARTQLLAEYP GARVDVAPCD ISDRRAVQAL VQRVETELAP IEVLLTVAGI IQVGPVQAMT LEHFDQAVST MLMGPVNLTL QVLPHMRERG RGRIGTVTSV GGKVAPPHLL PYSTAKFGAV GFSEGLTAEL AGTGITATTI VPGLMRTGSH DAAQFTGDVA REFAWFGPSA SLPLLAMDAE RAAERMVHGV LEGHTHVMLS PVTQVGSRVH GLAPSFTTRL MGLANRVLPT APAVDPLGPG TTVEGRVARQ GLTGRARRVV DALSTLGDRA GEQINERGA
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