| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4117 |
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| Symbol | |
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| ID | 5335498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | - |
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| Start bp | 2764193 |
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| End bp | 2765839 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001363844 |
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| Protein GI | 152968060 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.357071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.208807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGACC CGCCCGTCCC GTGGTGGCGG ACCGCCGCCG TCTACCAGGT CCTCCCCCGC
AGCTTCGCCG ACGGCGACGG CGACGGCCTC GGCGACCTCG CCGGGCTGCG GGCGCGGCTG
CCGCACCTGG CCGGGCTCGG CGTGGACGCG GTGTGGGTGA ACCCCTGGTA CCCCTCCCCG
CTGGCCGACA ACGGCTACGA CGTCGACGAC TACCGCGACG TCGACCCCGC GCTGGGCGGC
CTGGAGGAGG CCGAGGCGTT CCTGCGGGAG GCCCACGAGC TGGGCCTGAA GGTCCTGCTG
GACATCGTCC CGAACCACAC CTCGAGCACC CACGCGTGGT TCCGGGCCGC GCTGGCCGGG
GACGCCCGGG CCCGGGCGCG GTACCTGTTC CGCCCCGGCC GGGGCGCGGA CGGCGAGCTG
CCGCCCAACG ACTGGGAGAG CTGCTTCGGG GGCCCGTCGT GGACGCGGGC GCCCGGCCCG
GACGGGCGCC CGGGCGAGTG GTACCTGCAC TCCTTCGCCC CCGAGCAGCC GGACCTGGAC
TGGCGCAACC CCGAGGTCCG CGCCGAGTTC GTCGACGTGC TGCGGTTCTG GTTCGACCGC
GGGGTCGACG GCTTCCGCGT CGACGTCGCC CACGGGCTGC TGAAGCAGGA CGGGCTGCCC
GACGCCCTCG GCCGCGACCG GCGCACCGAG GAGCACCCGG GCTGGGACCA GGACGAGGTG
CACGAGGTGT ACCGGGAGTG GCGCGCGGTG GCCGACGCCT ACGACCCGCC GCGGGTCTTC
GTCGCCGAGG CGTGGGTCGC CCGCCGCGAG CGCCTGCCGC TGTACCTGCG CCCCGACGAG
CTGCACATGG CCTTCGAGTT CGACCCCCTG CACGTGGCCT GGCGGGAGGG GCCGTGGCGG
CGGGTGGTCG AGCGCGGGCT CGCCGTCGCG GAGCTGACCG GGGCCCCGAG CGCGTGGGCG
CTGACCAACC ACGACGTGGT GCGCCAGGTC ACCCGCTACG CCCGTTCCCA GCCGCCCGAG
CACGGCTCGA ACGTGACCGA GCGGGCGCGC TGGGGCGAGG AGGTGCCGGA CCTGGCCCTG
GGCCGGGCCC GGGCCCGGGC GGCGTTCCTG CTGACCGCGG CGCTGCCCGG TCTGGTGTAC
GTGTTCAACG GCGAGGAGCT GGGGCTGGAG GAGGTCGAGG ACCTGCCCGA CGCGCTGCGC
CGCGACCCGA TCCACACCCG TTCCGGCGGC GCCGACCCCG GGCGGGAGGG GTCCCGGGTG
CCGCTGCCCT GGTCCGGGGA CCGGCCGCCG TTCGGGTTCT CCCCGCCCGG CTCGCCCGCG
CCCGCGTTGC CGCAGCCGGC GGGCTGGGCG GCGCTGAGCG CGCAGGCCCA GGACCGCGAC
CCGGCCTCCA CGCTGAACCT CTACCGCCGG GTGCTGCACC TGCGGCGCGA GCTGGTGGCC
GCGGCGGACC CGCTGCGCTG GGACGAGGCC CCCGAGGGGG TGCTCGCCTA CGCGCGCGGG
ACGACCCGCG TGTGGGTGAA CTTCGGCCCC GGCGACGTCG AGCTGCCGGC CGGGGTGGAG
GTCCTCGTGC GCTCGGGCCC GGGGCCCGGG GGCGTGCTGC CGGTGGACAC CGCCGCGTGG
TTCGTGCCCG CCCGGCCGCC GCGCTGA
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| Protein sequence | MIDPPVPWWR TAAVYQVLPR SFADGDGDGL GDLAGLRARL PHLAGLGVDA VWVNPWYPSP
LADNGYDVDD YRDVDPALGG LEEAEAFLRE AHELGLKVLL DIVPNHTSST HAWFRAALAG
DARARARYLF RPGRGADGEL PPNDWESCFG GPSWTRAPGP DGRPGEWYLH SFAPEQPDLD
WRNPEVRAEF VDVLRFWFDR GVDGFRVDVA HGLLKQDGLP DALGRDRRTE EHPGWDQDEV
HEVYREWRAV ADAYDPPRVF VAEAWVARRE RLPLYLRPDE LHMAFEFDPL HVAWREGPWR
RVVERGLAVA ELTGAPSAWA LTNHDVVRQV TRYARSQPPE HGSNVTERAR WGEEVPDLAL
GRARARAAFL LTAALPGLVY VFNGEELGLE EVEDLPDALR RDPIHTRSGG ADPGREGSRV
PLPWSGDRPP FGFSPPGSPA PALPQPAGWA ALSAQAQDRD PASTLNLYRR VLHLRRELVA
AADPLRWDEA PEGVLAYARG TTRVWVNFGP GDVELPAGVE VLVRSGPGPG GVLPVDTAAW
FVPARPPR
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