| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3947 |
|---|
| Symbol | |
|---|
| ID | 5337745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 2945613 |
|---|
| End bp | 2946839 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001363674 |
|---|
| Protein GI | 152967890 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0070874 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCG AGACCCCCGC GAAGGAGGTC CCGCCCGGGG GCCCGGCGGG CGCCGCGCCG
CGGCGCCCCG CCCCGCGCCG GACCTGGCTC GTCACCGTCT TCGCCGTCGT CGGCGCCGTC
CTCGTCGGTG CGGTCCTCAT CGCCGTCGGC GACGCGCGCA CGCGCGCCGC GGCCGGCTAC
TTCTTCAGCT ACCCGTGGGA CACCTTCTCC AACGCCTGGT ACGCCGTGCG CGACGCCTAC
CTGGCGCTGC TGGAGGGCGC GCTCTACAGC CCGGACCTGT CCGGGCGGGC CGCCCTGGGC
CCGATCTCGG AGACGCTGGT CAACGCCACG CCGCTCGTCC TGGGCGGTCT CGCGGTGGCC
CTGGCGTTCC GGGTGGGGCT GTTCAACATC GGCGGCCAGG GGCAGGTGAT CCTCGGCGCG
GTCGGCGCCG CCTGGCTCGG GTTCGCCTGG GACCTGCCCG CCGGGCTGCA CCTGCTCGTC
GCCCTCGTCG GCGGCCTCGT CGGCGGCCTG CTCTGGGGCG CGCTCATCGG CTGGCTCAAG
GCCCGCACCG GCGCCCACGA GGTCATCACC TCGATCATGC TGAACTACGT CGCGCTGAAC
CTGCTGAACT TCCTGCTCAG CACCCGCGGC TTCCAGCGCC CGCCCTACGG GCAGGCGATC
TCCGAGCAGG TCGCGGGCAG CGCGCGCCTG CCGCTGCTGC TGGGCAGCCC GCTGCGCGTG
CACGCCGGCC TGCTGCTGGC GCTGCTGGCG GCGGTGGTCG TGCACTGGCT GTTCAGCCGC
TCCCGCCTCG GCTTCCGGCT GCGCGCCGTG GGCGCCAACC CCGAGGCCGC GCGCACCGCG
GGCATGTCGG TGGGCCGCCT GCAGATCACC GCGATGGCGC TCTCCGGCGG GCTCGCCGGC
CTGGCCGGCG CCTCGCAGGT CCTCGGCGTC AGCGGCAGCG TCACGGGCAG CGTGGCCGGC
AGCATCGGCT TCGACGCGAT CACCGTGGCC CTGCTGGGCC GCAACAACCC CTACGGCGTC
ATCGGGGCCG GTCTGCTGTT CGGCGGCCTG CGCGCCGGCG GGGTGCAGAT GCAGTCGACC
ACCGGCGTGC CGGTGGACCT GGTGGGGGTC CTGCAGGCCC TCATCGTGCT GTTCATCGCC
GCCCCCGCCC TCGTGCGCGC CGTCTTCCGG CTGCGCGCGG GCGGCGGCGG CGTCGGGACC
GAGCTGGCCG GGGGGTGGAG CAGGTGA
|
|---|
| Protein sequence | MSTETPAKEV PPGGPAGAAP RRPAPRRTWL VTVFAVVGAV LVGAVLIAVG DARTRAAAGY
FFSYPWDTFS NAWYAVRDAY LALLEGALYS PDLSGRAALG PISETLVNAT PLVLGGLAVA
LAFRVGLFNI GGQGQVILGA VGAAWLGFAW DLPAGLHLLV ALVGGLVGGL LWGALIGWLK
ARTGAHEVIT SIMLNYVALN LLNFLLSTRG FQRPPYGQAI SEQVAGSARL PLLLGSPLRV
HAGLLLALLA AVVVHWLFSR SRLGFRLRAV GANPEAARTA GMSVGRLQIT AMALSGGLAG
LAGASQVLGV SGSVTGSVAG SIGFDAITVA LLGRNNPYGV IGAGLLFGGL RAGGVQMQST
TGVPVDLVGV LQALIVLFIA APALVRAVFR LRAGGGGVGT ELAGGWSR
|
|---|
| |