Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3530 |
Symbol | |
ID | 5336763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 3416354 |
End bp | 3418507 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | Prolyl oligopeptidase |
Protein accession | YP_001363257 |
Protein GI | 152967473 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.345733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.681062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACCC CGAGCCCCGC GCCGTCCTCC CCGGGTGCGG CCCCCGCTCC GCGCCTGGAC CTCGTCGACG TCCTGCACGG GGTGCCCGTG CCCGACCCCT ACCGCTGGCT GGAGGACGCC GACGACGAGC GGACCCGGGC CTGGTCGGCG TGGCAGGACG AGGCGTGGGA GGCGTTCGCC GCGACCCTGC CGGGCCGGGA GCGGCTGGAG CGGCGGGTGC GCGAGCTCAT GGCGACGGGG TCGGTCGGCA CCCCCGTGCA CCGCGGGGAG CGGGTGTTCC GCACCCGGCG CGACCCGGCC GCCGAGCACG CCGTGCTGCA GGTGCAGGAC CCCGGCGCCG CGCCCCGGAC GCTGGTGGAC CCGGTGGCGC TGGACCCCTC GGGCACGACG ACCCTGGACG GCTGGCGGCC CAGCGTCGAG GGCGACCTGG TCGCCTACCA GCTCTCCGAG GGCGGCAGCG AGGAGAGCGT CCTGCGGGTG CTCGACGTCG CCTCCGGCGA TGTGGTCGAC GGGCCGGTGG ACCGCGCGCG CTACTCCCCG ATCGCGTGGC TGCCCGCGGG CGCCGGCGGG GAGCGGTCGT TCTACTACGT GCGCCGGCTG CCCCCCGAGG CCGTGCCCGC CGACGAGCGG CAGTACCACC GGCGGGTGTA CCTGCACCGG CTGGGCACCG ACCCCGCCGA GGACGTCGAG GTGTTCGGCG AGGGGATGTC GAGGACGAAC TACTACGGGG TCTGGACCTC CCGCGACGGG CGCTGGCTGG TGGTCAGCGC CTCCGACGGC ACCGCCCCGC GCAACGACGT GTGGCTGGCG GACCTGTCGG CCTCCGACCC GGCCGCGCCG GCGTTCCGGA CGGTCGTGGC GGGGCGGGAC GCGAGCACCA GCGCGTGGGT GGGCCGCGAC GGGCGGCTGT ACGTGTTCAC CGACCTCGAC GCCCCCCGCG GGCGCCTGGC CGTCGCCGAC CCCTCCGCGC CGGAGGTGGA GCACTGGCGC GACCTGGTGC CGCAGGCGGA GGCCCTCCTC GACGACGTGG CCGTGCTCGA CGGTCCGGAG CTCCCCCGCC CGCTGCTGGT GGTGGGCTGG ACCGAGCACG CCGTCAGCTC GGTGACCGTG CACGACCTGG CGACGGGCGC GCGGCTGGAG GGTGCGCGGG GCCGGGTGGA GCTGCCGGGG ACGGGGTCCA TCGGCGGTCT CGTCGCCCGT CCCGAGCCCG GGCACGAGCT GTGGTTCGGC TACACCGACG CCACCACCCC CGCGCACGTG TGGCGCTTCG ACGCCCGCAC CCACGAGCTG TCCCTGGAGT CCGCCCCGCC GGGGGCCGTG CGGGTCCCGC CGGTGCTCAG CCGGCTGCTG GAGTACCCCA GCCCGGACGG CACCACCGTG CGCCTGCAGC TGACCGTGCG CGCGGACCTG CTCGACGCCG ACGGCGTCCC CAGCGCCCCG GTGCCGACGA TCCTCTACGG CTACGGCGGC TTCGGCATCA GCCTCTCCCC GCACTACGCC CCCGACGCGC TGGCCTGGGT GGAGGCCGGC GGCGCCTACG CCGTGGCGAA CCTGCGCGGC GGCGGCGAGG AGGGCGAGGA CTGGCACCGG GCGGGGATGC GCGAGCACAA GCAGGACGTC TTCGACGACT TCCACGCCGC GGCCCGGTTC CTGGTGCGCG AGGGCTTCAC CACCCCGGCG CAGCTGTGCG TGCACGGCGG GTCCAACGGC GGTCTGCTCG TGGGCGCCGC GGCGACCCAG GAGCCGTCGC TGTTCGCGGG GGTGGTGTGC AGCGCGCCGC TGCTGGACAT GGTCCGCTAC GAGCAGCACG GGCTGGGCGC GACGTGGAGC GAGGAGTACG GCAGCGCCGC GGACCCGGTG GAGTTCGGGT GGCTGCACGC CTACTCCCCC TACCACCGGG TGGTGGAGGG GACGGCGTAC CCGGCGGTGC TGTTCACCGT CTTCGACGGG GACAGCCGGG TGGACCCCCT GCACGCCCGC AAGCTGTGCG CGGCCCTGCA GCACGCGACC TCCTCGGACC CGGCGACCCG GCCGGTGCTG TTGCGCCGGG AGGGCGACGT GGGGCACGGT GCCCGCTCGG TGTCCCGCAG CGCGGGGCTG GTGCGCGACA CCCTCGCCTT CGCCGCCCGG GTCACCGGCC TCGACCTGAC CTGA
|
Protein sequence | MSTPSPAPSS PGAAPAPRLD LVDVLHGVPV PDPYRWLEDA DDERTRAWSA WQDEAWEAFA ATLPGRERLE RRVRELMATG SVGTPVHRGE RVFRTRRDPA AEHAVLQVQD PGAAPRTLVD PVALDPSGTT TLDGWRPSVE GDLVAYQLSE GGSEESVLRV LDVASGDVVD GPVDRARYSP IAWLPAGAGG ERSFYYVRRL PPEAVPADER QYHRRVYLHR LGTDPAEDVE VFGEGMSRTN YYGVWTSRDG RWLVVSASDG TAPRNDVWLA DLSASDPAAP AFRTVVAGRD ASTSAWVGRD GRLYVFTDLD APRGRLAVAD PSAPEVEHWR DLVPQAEALL DDVAVLDGPE LPRPLLVVGW TEHAVSSVTV HDLATGARLE GARGRVELPG TGSIGGLVAR PEPGHELWFG YTDATTPAHV WRFDARTHEL SLESAPPGAV RVPPVLSRLL EYPSPDGTTV RLQLTVRADL LDADGVPSAP VPTILYGYGG FGISLSPHYA PDALAWVEAG GAYAVANLRG GGEEGEDWHR AGMREHKQDV FDDFHAAARF LVREGFTTPA QLCVHGGSNG GLLVGAAATQ EPSLFAGVVC SAPLLDMVRY EQHGLGATWS EEYGSAADPV EFGWLHAYSP YHRVVEGTAY PAVLFTVFDG DSRVDPLHAR KLCAALQHAT SSDPATRPVL LRREGDVGHG ARSVSRSAGL VRDTLAFAAR VTGLDLT
|
| |