Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0966 |
Symbol | |
ID | 5335206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1315301 |
End bp | 1317166 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | glycoside hydrolase family 2 sugar binding |
Protein accession | YP_001360718 |
Protein GI | 152964934 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0165303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCCAAG ACCCGACCAC CGCCGGAGCC GGCGGGGGAG TGCCGCGCCC GGAGCACCCC CGGCCCTCGG TGGTGCGCGC CGACTGGATC AACCTCAACG GCACCTGGGG GTTCGAGGTG GACCCGGGCG ACTCCGGCCT GGAGCGCGGC GTGCGCGACC GCCCGCTGGC GGGGTCCATC ACCGTGCCCT TCGCCCCCGA GTCCGAGCTG TCCGGCATCG GGGACACCGA CTTCCTGCCC GCGGTCTGGT ACCGCCGCGA GGTCGCCATC CCCGAGGACT GGGCCGGGCG CCGGACGCTG CTGCACTTCG GCGCCGTCGA CCACGACGCC ACCGTGTGGG TCGACGGGGA GGAGGTCGTG CGCCACCGCG GCGGGTTCAC CCCCTTCACC GCCGACCTCG GCCACCGCCG CGGCACCGTC ACCGTCGTCG TCCGCGCCCG CGACGACCAC CGCGGCCCGC AGGCGCGCGG CAAGCAGTCC ACCCGCTACG ACAACTACGA GTGCCTCTAC ACCCGCACCA CCGGCATCTG GCAGACCGTC TGGGCCGAAC CCGTCCCCGA CGTCTCGCTG GGCCGCCCGC GGATCACCCC CGACGTCGCC GGCTCCACCT TCCACCTGGA GCAGCCCCTG CGGCGCAGCG GGACCGGCGC CGTCGGCGAC CGGGCGGGCT GGACGCTCAC GGCCTCGGTC CGCGACGCCG CCGGGGAGGT CGTCACCGCG ACCGTGCGCG CCGACCTCGA CCTCTCCCCG CGCCTGGTCC TGCCCGTCCC CGCCGACCGG GTCCGGCTCT GGGAGCCCGC CGACCCGCAC CTGTACGACG TCACCGTGAC CCTCGCCGAC GCCTCCGGCG CCGTCGTCGA CACGGTGGAG ACCTACGCGG GCCTGCGCTC GGTGAGCATC GACGGCAAGG CCGTCCTGCT CAACGGCCGC CCGGTCTTCC AGCGGCTGGT GCTGGACCAG GGCTACTACC CCGACGGGCT GATGACCGCG CCCACCGACG CCGCGCTGGT GGCGGACATC GAACTGTCCC TGGCGGCCGG CTTCAACGGC GCCCGGCTGC ACCAGAAGGT CTTCGAGGAG CGCTTCCTCT TCCACGCCGA TCGCCTCGGC TACCTGGTGT GGGGCGAGTT CGGGGACTGG GGCGCGGCCG AGGAGGGCTC CAGCCACCGC GGGGAGTACC AGCAGCCCAC GCCGAACTTC GTCAGCCAGT GGCTGGAGGC GCTGGAGCGC GACTACTCCC ACCCCTCGAT CGTGGGCTGG TGCGGGCTGA ACGAGACCCA CCAGCCGCTC ACCGACCGCG GGCAGGTCCT CGACGACGCG ACGCGGGCGA TGTTCCTCGC CGCCAAGGCG ATGGACACCT CCCGCCCGGT GCTGGACGCC TCCGGCTACT CCCACCGCGT CCTGGAGTCC GACGTGTGGG ACTCGCACAA CTACACCCAG GACCCGGCGG AGTTCGCGCG GGAGATGGCC GGGCTGGCCC AGGGGCGCCC GGACACCAAC TTCGCGCACG GCACCACCAC GGTCATCTCC CTGCCCTACC AGGGGCAGCC CTGGTTCTGC AGCGAGTTCG GCGGGATCTG GTGGCGCCCG GACACCGCCG CCAGCGACCC CGACGTCGAC CGCGGGGCGG AGTCCTCGTG GGGCTACGGC GAGCCGCCGC GCAGCGAGGA GGAGTTCCAC CACCGCTTCG AGGGCCTGAC CGGGGTCCTG CTGGACGACC CGCTGATGTT CGGCTACTGC TACACCCAGC TCACCGACGT CTTCCAGGAG CAGAACGGGA TCTACTCCTT CGACCGGTCG GTGAAGCTGG ACGTGGAGCG GGTGCGCGCC GCCCAGCAGC GACCGGCGGC GATCGAGAGA ACCTGA
|
Protein sequence | MPQDPTTAGA GGGVPRPEHP RPSVVRADWI NLNGTWGFEV DPGDSGLERG VRDRPLAGSI TVPFAPESEL SGIGDTDFLP AVWYRREVAI PEDWAGRRTL LHFGAVDHDA TVWVDGEEVV RHRGGFTPFT ADLGHRRGTV TVVVRARDDH RGPQARGKQS TRYDNYECLY TRTTGIWQTV WAEPVPDVSL GRPRITPDVA GSTFHLEQPL RRSGTGAVGD RAGWTLTASV RDAAGEVVTA TVRADLDLSP RLVLPVPADR VRLWEPADPH LYDVTVTLAD ASGAVVDTVE TYAGLRSVSI DGKAVLLNGR PVFQRLVLDQ GYYPDGLMTA PTDAALVADI ELSLAAGFNG ARLHQKVFEE RFLFHADRLG YLVWGEFGDW GAAEEGSSHR GEYQQPTPNF VSQWLEALER DYSHPSIVGW CGLNETHQPL TDRGQVLDDA TRAMFLAAKA MDTSRPVLDA SGYSHRVLES DVWDSHNYTQ DPAEFAREMA GLAQGRPDTN FAHGTTTVIS LPYQGQPWFC SEFGGIWWRP DTAASDPDVD RGAESSWGYG EPPRSEEEFH HRFEGLTGVL LDDPLMFGYC YTQLTDVFQE QNGIYSFDRS VKLDVERVRA AQQRPAAIER T
|
| |