Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2545 |
Symbol | |
ID | 8381698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2736375 |
End bp | 2738033 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645005310 |
Product | integral membrane protein MviN |
Protein accession | YP_003162480 |
Protein GI | 256833753 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0233456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.204601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTCGG GGACACCCAC AACCGACAAC TCGCAATCGT TAGGGAAAAG CTCCCTCCTC ATGGCCTCAG GCACGGCCGT GTCACGTGGG TTAGGACTCA TCCGTAACAT CTTGCTGGTC GCGGTTCTCG GCGCTACCGG ACTCACCGCA GACGCCTTCG ACGTCGCAAA CAAAATCCCC AACATTTTGT ACGCAATGAT CGCCGGTGGG GTACTCAACG CCGTCATCGT CCCGCAAGTC ACCCGCGCCT ACCGGGCAAA AAACGGTGAC GAACAAGTGG ACAAACTCCT CACCTTCTCC GCAACCATCC TGCTGGCACT CACCCTGATC TGCACAGCCG GAGCAACCAT CATTGTCGCC CTCTACACCT CCAATGACTG GACCACCGAA CAAACCAGCC TCGCCGTTGC CTTTGGGTAC TGGTGCATTC CCCAACTGTT CTTCTACGGC CTCTACACAA TCCTTGGTCA AGTCCTCAAC GCCAGGAAAC AATTCGGGCC CTACATGTGG GCCCCGGCAC TCAACAACGT CATCTCTATC ATCGGATTTG CGCTGTTCCT CTGGATCTTT GGCCCCCATG CCATCACCGA GGTGGACGCA CTATCCGAAT GGACCGGCCC TAAAGTCGCC GTCATCGGGG TGTCCGCAAC CGCAGGTGTC ATGGCACAGG CGCTCATCCT CCTGGTCCCG CTCTACCGGT CCGGATTCCG TTGGACCCTC CGCTTTGGGT TGCGCGGATT CGGGTTACGC ACCGTAGGCA AAGTGGGGTT GTGGACCACC CTCGCTATCC TGCTCGACCA ACTCGCAGTC TGGATCACCA CAAAGATCGC CACCGCAGCA CCCGACGCAT CAACCGCCGG TGTCGACGTC GTCGCAGGGA ACGCCGCCTA CACCCAGGCG CTCATGATCT ACCTGCTGCC CCACTCGCTG GTCACTGTCT CCGTTGCCAC CGCACTGTTC ACCGGGATGA GCGCTGCAGT CAACGCAGGT GACATCAGTA AAGTCCGCGA ACTCGTCTCC CAAGGACTGC GAGTCATCGC CGTCTTCACT GTTTTCGCCA CCGCACTCTT CCTCGTTCTC TCCGTCCCCG TCACCAAAGT CATCATCCCC ACACTGAGCC CAGCAGAAGT CGGCCCGGTG TCCCGGGTGT TGTTTGCCAT GGCACTGGGA CTCGTCCCCC TCGGTGCAAT GGTCATGATG AAATGGGTGT ACTTTGCCTT CGAAGACGGC CGGTCCGTTT TCCTCTTCCA AATCCCCGTC GTCATTGTTC TCATCGGTGG AGCAGTCGTC ACCATGCTCA CCACCCCCGG GGAATGGTGG GTATTCGGCA TTGGGCTGTC CATGGCCGCC TCCAACCTTG TTGCCGTTGT CCTGCGCGTA CGAGGAATTA CCGAACGACT CAACGGACTC GATGTCGCAC GTATTGTCAG GCTCCACGTC CAACTGGTTG TCGCTGCTGC CGTCGCCTCG GCTGGTGGTT ACCTCGTCCT GCGAGTATGG GGCTTTACCG CCGACAACAC ATGGTGGTGG GCAGTGTTCA TCTGCATTCT TGTCACCACC GTCATGGTTG CTCTCTACGT TCTCACCCTC CAAGTGATGC GCGTCCAAGA GCTCACCGCA CTTCTTACCC CCATTCGCCG CAAAATTTCA CGACGCTGA
|
Protein sequence | MSSGTPTTDN SQSLGKSSLL MASGTAVSRG LGLIRNILLV AVLGATGLTA DAFDVANKIP NILYAMIAGG VLNAVIVPQV TRAYRAKNGD EQVDKLLTFS ATILLALTLI CTAGATIIVA LYTSNDWTTE QTSLAVAFGY WCIPQLFFYG LYTILGQVLN ARKQFGPYMW APALNNVISI IGFALFLWIF GPHAITEVDA LSEWTGPKVA VIGVSATAGV MAQALILLVP LYRSGFRWTL RFGLRGFGLR TVGKVGLWTT LAILLDQLAV WITTKIATAA PDASTAGVDV VAGNAAYTQA LMIYLLPHSL VTVSVATALF TGMSAAVNAG DISKVRELVS QGLRVIAVFT VFATALFLVL SVPVTKVIIP TLSPAEVGPV SRVLFAMALG LVPLGAMVMM KWVYFAFEDG RSVFLFQIPV VIVLIGGAVV TMLTTPGEWW VFGIGLSMAA SNLVAVVLRV RGITERLNGL DVARIVRLHV QLVVAAAVAS AGGYLVLRVW GFTADNTWWW AVFICILVTT VMVALYVLTL QVMRVQELTA LLTPIRRKIS RR
|
| |